RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ZNF473Q8WTR7 871 aaKnown RBP15.94■□□□□ 0.14
PCF11-204ENST00000530660 POLR3EQ9NVU0 708 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 HIP1O00291 1037 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 CASP14P31944 242 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 LSP1P33241 339 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 NR1I3Q14994 352 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 MYSM1Q5VVJ2 828 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 ATP6V0A4Q9HBG4 840 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 TFR2Q9UP52 801 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 NDUFB9Q9Y6M9 179 aa15.94■□□□□ 0.14
PCF11-204ENST00000530660 MYH8P13535 1937 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 SYNE3Q6ZMZ3 975 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 MICALCLQ6ZW33 695 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 BSDC1Q9NW68 430 aaPredicted RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 SALL1Q9NSC2 1324 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 MCM3P25205 808 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 APBA1Q02410 837 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 YTHDF3Q7Z739 585 aaKnown RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 EAF2Q96CJ1 260 aaPredicted RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 MED15Q96RN5 788 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 AKAP12Q02952 1782 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 GOLGA8KD6RF30 607 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 ATP1A1P05023 1023 aaKnown RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 ANO1Q5XXA6 986 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 SHC4Q6S5L8 630 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 RNPC3Q96LT9 517 aaKnown RBP15.93■□□□□ 0.14
PCF11-204ENST00000530660 PLCD4Q9BRC7 762 aa15.93■□□□□ 0.14
PCF11-204ENST00000530660 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 RWDD2BP57060 319 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 SKOR1P84550 965 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 PSMD2Q13200 908 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 THEMIS2Q5TEJ8 643 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 TRAPPC11Q7Z392 1133 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 SPATS2Q86XZ4 545 aaKnown RBP15.92■□□□□ 0.14
PCF11-204ENST00000530660 TTF2Q9UNY4 1162 aaKnown RBP15.92■□□□□ 0.14
PCF11-204ENST00000530660 ATP2C2O75185 946 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 FXR1P51114 621 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCF11-204ENST00000530660 CDCA2Q69YH5 1023 aaPredicted RBP15.92■□□□□ 0.14
PCF11-204ENST00000530660 HDAC7Q8WUI4 952 aa15.92■□□□□ 0.14
PCF11-204ENST00000530660 DNM1LO00429 736 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 ZNF185O15231 689 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 SNUPNO95149 360 aaKnown RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 KRT14P02533 472 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 ERVK-24P63145 666 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 TSEN2Q8NCE0 465 aaKnown RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 CCT8L2Q96SF2 557 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 EPN3Q9H201 632 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 N4BP2Q86UW6 1770 aaPredicted RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 KDRP35968 1356 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 SAAL1Q96ER3 474 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 MFAP3LO75121 409 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 C2orf54Q08AI8 447 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 RBBP5Q15291 538 aaKnown RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 AENQ8WTP8 325 aaKnown RBP15.91■□□□□ 0.14
PCF11-204ENST00000530660 FAM184BQ9ULE4 1060 aa15.91■□□□□ 0.14
PCF11-204ENST00000530660 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
PCF11-204ENST00000530660 PDE2AO00408 941 aaPredicted RBP15.9■□□□□ 0.14
PCF11-204ENST00000530660 SASH1O94885 1247 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 CDC25AP30304 524 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 PLCB4Q15147 1175 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 SLC9C2Q5TAH2 1124 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 IGSF1Q8N6C5 1336 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 RPS6KA3P51812 740 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 ICA1Q05084 483 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 TEFQ10587 303 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 RCSD1Q6JBY9 416 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 RSRC1Q96IZ7 334 aaKnown RBP15.9■□□□□ 0.14
PCF11-204ENST00000530660 NAA15Q9BXJ9 866 aaKnown RBP15.9■□□□□ 0.14
PCF11-204ENST00000530660 NUCKS1Q9H1E3 243 aaKnown RBP15.9■□□□□ 0.14
PCF11-204ENST00000530660 RIPOR2Q9Y4F9 1068 aa15.9■□□□□ 0.14
PCF11-204ENST00000530660 PDIA3P30101 505 aaKnown RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 SLC8A3P57103 927 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 RASSF8Q8NHQ8 419 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 MYCBPAPQ8TBZ2 947 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 NSMCE1Q8WV22 266 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 SAR1BQ9Y6B6 198 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 A0A1B0GTH6 734 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
PCF11-204ENST00000530660 OPA1O60313 960 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 NPM1P06748 294 aaKnown RBP eCLIP15.89■□□□□ 0.13
PCF11-204ENST00000530660 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
PCF11-204ENST00000530660 NNTQ13423 1086 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms