RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CYP7A1P22680 504 aa25.37■■□□□ 1.65
TSPAN4-219ENST00000530404 PABPC4Q13310 644 aaKnown RBP eCLIP25.37■■□□□ 1.65
TSPAN4-219ENST00000530404 ZNF512BQ96KM6 892 aaPredicted RBP25.37■■□□□ 1.65
TSPAN4-219ENST00000530404 DEFB118Q96PH6 123 aa25.37■■□□□ 1.65
TSPAN4-219ENST00000530404 TRIM34Q9BYJ4 488 aa25.37■■□□□ 1.65
TSPAN4-219ENST00000530404 IDH1O75874 414 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-219ENST00000530404 GCLCP48506 637 aaPredicted RBP25.36■■□□□ 1.65
TSPAN4-219ENST00000530404 MIGA1Q8NAN2 632 aa25.36■■□□□ 1.65
TSPAN4-219ENST00000530404 WDR18Q9BV38 432 aa25.36■■□□□ 1.65
TSPAN4-219ENST00000530404 DDX60LQ5H9U9 1706 aaKnown RBP25.36■■□□□ 1.65
TSPAN4-219ENST00000530404 TFRCP02786 760 aaKnown RBP25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 ASNSP08243 561 aa25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 CEP85Q6P2H3 762 aa25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 HTATIP2Q9BUP3 242 aa25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 TMOD4Q9NZQ9 345 aa25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 EXOC6BQ9Y2D4 811 aa25.35■■□□□ 1.65
TSPAN4-219ENST00000530404 BACE1P56817 501 aa25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 IRX3P78415 501 aaPredicted RBP25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 METTL16Q86W50 562 aaKnown RBP25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 FOXP4Q8IVH2 680 aaPredicted RBP25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 MAGEB6Q8N7X4 407 aa25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 ANTXR1Q9H6X2 564 aa25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 ZBTB21Q9ULJ3 1066 aa25.34■■□□□ 1.65
TSPAN4-219ENST00000530404 FRMPD3Q5JV73 1810 aa25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 TRIM32Q13049 653 aa25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 PANK1Q8TE04 598 aa25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 P2RX7Q99572 595 aaKnown RBP25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 MYH7P12883 1935 aa25.33■■□□□ 1.65
TSPAN4-219ENST00000530404 BAZ2AQ9UIF9 1905 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-219ENST00000530404 HLA-DOAP06340 250 aa25.32■■□□□ 1.64
TSPAN4-219ENST00000530404 RBM27Q9P2N5 1060 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-219ENST00000530404 GJD2Q9UKL4 321 aa25.32■■□□□ 1.64
TSPAN4-219ENST00000530404 USP17L10C9JJH3 530 aa25.31■■□□□ 1.64
TSPAN4-219ENST00000530404 USP5P45974 858 aa25.31■■□□□ 1.64
TSPAN4-219ENST00000530404 AACSQ86V21 672 aa25.31■■□□□ 1.64
TSPAN4-219ENST00000530404 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.31■■□□□ 1.642e-6■■■■□ 22.9
TSPAN4-219ENST00000530404 TXNRD2Q9NNW7 524 aa25.31■■□□□ 1.64
TSPAN4-219ENST00000530404 MORF4L1Q9UBU8 362 aa25.31■■□□□ 1.64
TSPAN4-219ENST00000530404 DIS3LQ8TF46 1054 aaKnown RBP25.3■■□□□ 1.64
TSPAN4-219ENST00000530404 IL1RAPL2Q9NP60 686 aa25.3■■□□□ 1.64
TSPAN4-219ENST00000530404 C19orf81C9J6K1 198 aa25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 GH2P01242 217 aa25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 HMGCRP04035 888 aa25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 HOXA7P31268 230 aaPredicted RBP25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 HERVK_113P62684 666 aa25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 ZYXQ15942 572 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-219ENST00000530404 DNAH12Q6ZR08 3092 aa25.28■■□□□ 1.64
TSPAN4-219ENST00000530404 CYP2B6P20813 491 aa25.28■■□□□ 1.64
TSPAN4-219ENST00000530404 PAWRQ96IZ0 340 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-219ENST00000530404 CRISPLD2Q9H0B8 497 aa25.28■■□□□ 1.64
TSPAN4-219ENST00000530404 EMILIN3Q9NT22 766 aa25.28■■□□□ 1.64
TSPAN4-219ENST00000530404 TRIB2Q92519 343 aa25.27■■□□□ 1.64
TSPAN4-219ENST00000530404 PAGR1Q9BTK6 254 aa25.27■■□□□ 1.64
TSPAN4-219ENST00000530404 BCL11AQ9H165 835 aa25.27■■□□□ 1.64
TSPAN4-219ENST00000530404 APBB1O00213 710 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 IGSF3O75054 1194 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 MAP3K12Q12852 859 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 Q3C1V9 767 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 GPRC5AQ8NFJ5 357 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 GINM1Q9NU53 330 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 RBPJLQ9UBG7 517 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 NR2E3Q9Y5X4 410 aa25.26■■□□□ 1.63
TSPAN4-219ENST00000530404 EVI5O60447 810 aa25.25■■□□□ 1.63
TSPAN4-219ENST00000530404 USP17L2Q6R6M4 530 aa25.25■■□□□ 1.63
TSPAN4-219ENST00000530404 POTEEQ6S8J3 1075 aa25.25■■□□□ 1.63
TSPAN4-219ENST00000530404 ERC1Q8IUD2 1116 aa25.25■■□□□ 1.63
TSPAN4-219ENST00000530404 RPTORQ8N122 1335 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 ERVK-9P63128 1117 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 ERVK-24P63145 666 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 DIEXFQ68CQ4 756 aaKnown RBP25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 TATDN1Q6P1N9 297 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 FEZ1Q99689 392 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 PORCNQ9H237 461 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 HMX1Q9NP08 348 aaPredicted RBP25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 SERPINB13Q9UIV8 391 aa25.24■■□□□ 1.63
TSPAN4-219ENST00000530404 ZBED9Q6R2W3 1325 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 EVX2Q03828 476 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 RAB3GAP1Q15042 981 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 RHPN1Q8TCX5 695 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 NUDT12Q9BQG2 462 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 PRO3102Q9H379 93 aa25.23■■□□□ 1.63
TSPAN4-219ENST00000530404 RLFQ13129 1914 aa25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 PLCD1P51178 756 aa25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 CERKLQ49MI3 558 aaPredicted RBP25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 NECAB2Q7Z6G3 386 aa25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 ACER1Q8TDN7 264 aa25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 RIOK1Q9BRS2 568 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 LAMA3Q16787 3333 aa25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 ZNFX1Q9P2E3 1918 aaKnown RBP25.22■■□□□ 1.63
TSPAN4-219ENST00000530404 PARP14Q460N5 1801 aa25.21■■□□□ 1.63
TSPAN4-219ENST00000530404 PRKAR2AP13861 404 aaKnown RBP25.21■■□□□ 1.63
TSPAN4-219ENST00000530404 CERS3Q8IU89 383 aa25.21■■□□□ 1.63
TSPAN4-219ENST00000530404 EHD4Q9H223 541 aa25.21■■□□□ 1.63
TSPAN4-219ENST00000530404 MAGEB6P1A0A0J9YX57 407 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 SHMT1P34896 483 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 PDE3AQ14432 1141 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 CCL14Q16627 93 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 ABCB5Q2M3G0 1257 aa25.2■■□□□ 1.62
TSPAN4-219ENST00000530404 GPR142Q7Z601 462 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms