RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 HACE1Q8IYU2 909 aa9.48□□□□□ -0.89
CTNND1-225ENST00000530094 PRDM1O75626 825 aa9.48□□□□□ -0.89
CTNND1-225ENST00000530094 MARCKSP29966 332 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-225ENST00000530094 ARL1P40616 181 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-225ENST00000530094 AOPEPQ8N6M6 819 aa9.48□□□□□ -0.89
CTNND1-225ENST00000530094 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
CTNND1-225ENST00000530094 ODF2LQ9ULJ1 636 aa9.48□□□□□ -0.89
CTNND1-225ENST00000530094 SMC6Q96SB8 1091 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 AS3MTQ9HBK9 375 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 ANAPC4Q9UJX5 808 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 M0QZ92 97 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 RXRAP19793 462 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 SYT1P21579 422 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 BCAMP50895 628 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 LRRC24Q50LG9 513 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 BEND3Q5T5X7 828 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 ANKS4BQ8N8V4 417 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 TGFBRAP1Q8WUH2 860 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 CEP170BQ9Y4F5 1589 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 ATP5DP30049 168 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 CCT6AP40227 531 aaKnown RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 DNM2P50570 870 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 PLCB3Q01970 1234 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 KRT25Q7Z3Z0 450 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 CCDC94Q9BW85 323 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-225ENST00000530094 CRB1P82279 1406 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 SKILP12757 684 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 TUBB2AQ13885 445 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 TXNRD1Q16881 649 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 GIMAP6Q6P9H5 292 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 TUBB2BQ9BVA1 445 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 USP40Q9NVE5 1235 aa9.47□□□□□ -0.89
CTNND1-225ENST00000530094 NOP56O00567 594 aaKnown RBP9.46□□□□□ -0.89
CTNND1-225ENST00000530094 TEKT1Q969V4 418 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 IBTKQ9P2D0 1353 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-225ENST00000530094 RPS6KA4O75676 772 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 HSPA4P34932 840 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 TRPC3Q13507 836 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 VPS72Q15906 364 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 APPBP2Q92624 585 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 AZI2Q9H6S1 392 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 DACT1Q9NYF0 836 aa9.46□□□□□ -0.89
CTNND1-225ENST00000530094 LUC7L2Q9Y383 392 aaKnown RBP9.46□□□□□ -0.89
CTNND1-225ENST00000530094 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.89
CTNND1-225ENST00000530094 GPAA1O43292 621 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 MXRA7P84157 204 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 TNFAIP1Q13829 316 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 GPR161Q8N6U8 529 aaKnown RBP9.46□□□□□ -0.9
CTNND1-225ENST00000530094 CCDC63Q8NA47 563 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 ARFGAP3Q9NP61 516 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 ZBTB21Q9ULJ3 1066 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 TMEM110-MUSTN1A8MSY1 372 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 DALRD3Q5D0E6 543 aaKnown RBP9.46□□□□□ -0.9
CTNND1-225ENST00000530094 LRRIQ1Q96JM4 1722 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 TCP10L2B9ZVM9 353 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 DYNC1I1O14576 645 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 YWHAEP62258 255 aaKnown RBP9.46□□□□□ -0.9
CTNND1-225ENST00000530094 CALCOCO2Q13137 446 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 DPH6Q7L8W6 267 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 SMC5Q8IY18 1101 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
CTNND1-225ENST00000530094 ADCY7P51828 1080 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 CCDC26Q8TAB7 109 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 IQCDQ96DY2 449 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 PTCH1Q13635 1447 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 ZNF804BA4D1E1 1349 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 ZNF532Q9HCE3 1301 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 ARHGEF35A5YM69 484 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 B4E1Z4 1266 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 IVLP07476 585 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 CHMLP26374 656 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 GJC1P36383 396 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 AK2P54819 239 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 BIRC3Q13489 604 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 PPP1R7Q15435 360 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 OVOS2A0A0G2JMS6 1433 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 OVOS2A0A0J9YW53 1432 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 OVOS2Q6IE36 1432 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 NUP58Q9BVL2 599 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 PUS3Q9BZE2 481 aaKnown RBP9.45□□□□□ -0.9
CTNND1-225ENST00000530094 ADAMTS13Q76LX8 1427 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 RPS6KB1P23443 525 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
CTNND1-225ENST00000530094 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
CTNND1-225ENST00000530094 LETM2Q2VYF4 491 aa9.44□□□□□ -0.9
CTNND1-225ENST00000530094 EDC3Q96F86 508 aaKnown RBP9.44□□□□□ -0.9
CTNND1-225ENST00000530094 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
CTNND1-225ENST00000530094 DCPSQ96C86 337 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms