RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
GMDS-206ENST00000530075 ADAM30Q9UKF2 790 aa8.4□□□□□ -1.06
GMDS-206ENST00000530075 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.06
GMDS-206ENST00000530075 WDR64B1ANS9 1081 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
GMDS-206ENST00000530075 FAM87AP0C7U9 286 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 CAP2P40123 477 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
GMDS-206ENST00000530075 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
GMDS-206ENST00000530075 RIN3Q8TB24 985 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 FOXQ1Q9C009 403 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
GMDS-206ENST00000530075 LRIG2O94898 1065 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 SLITRK5O94991 958 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 CST3P01034 146 aaPredicted RBP8.38□□□□□ -1.07
GMDS-206ENST00000530075 ZNF165P49910 485 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 OGFOD3Q6PK18 319 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 ZNF765Q7L2R6 523 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 ZDHHC13Q8IUH4 622 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 TOP6BLQ8N6T0 577 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 KLHL3Q9UH77 587 aa8.38□□□□□ -1.07
GMDS-206ENST00000530075 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 PRR19A6NJB7 356 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 ADAM23O75077 832 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 CCDC81Q6ZN84 652 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 FAM13CQ8NE31 585 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
GMDS-206ENST00000530075 GSC2O15499 205 aa8.36□□□□□ -1.07
GMDS-206ENST00000530075 SOX9P48436 509 aa8.36□□□□□ -1.07
GMDS-206ENST00000530075 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
GMDS-206ENST00000530075 EOMESO95936 686 aa8.35□□□□□ -1.07
GMDS-206ENST00000530075 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
GMDS-206ENST00000530075 FAM214BQ7L5A3 538 aa8.35□□□□□ -1.07
GMDS-206ENST00000530075 MIPEPQ99797 713 aa8.35□□□□□ -1.07
GMDS-206ENST00000530075 ZNRF3Q9ULT6 936 aa8.35□□□□□ -1.07
GMDS-206ENST00000530075 U3KQE9 123 aa8.35□□□□□ -1.07
GMDS-206ENST00000530075 TGFB1P01137 390 aa8.34□□□□□ -1.07
GMDS-206ENST00000530075 OVOS1Q6IE37 1185 aa8.34□□□□□ -1.07
GMDS-206ENST00000530075 MFSD2AQ8NA29 543 aa8.34□□□□□ -1.07
GMDS-206ENST00000530075 HEXIM2Q96MH2 286 aaKnown RBP8.34□□□□□ -1.07
GMDS-206ENST00000530075 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
GMDS-206ENST00000530075 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 FBXW10Q5XX13 1052 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 CDH24Q86UP0 819 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 SLFN12Q8IYM2 578 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 ATG4CQ96DT6 458 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 SEC16BQ96JE7 1060 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 SPATA32Q96LK8 384 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 FERD3LQ96RJ6 166 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 OSBPL1AQ9BXW6 950 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 ATG3Q9NT62 314 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 GMIPQ9P107 970 aa8.33□□□□□ -1.08
GMDS-206ENST00000530075 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
GMDS-206ENST00000530075 COL9A2Q14055 689 aaPredicted RBP8.32□□□□□ -1.08
GMDS-206ENST00000530075 RUFY4Q6ZNE9 571 aa8.32□□□□□ -1.08
GMDS-206ENST00000530075 BAHD1Q8TBE0 780 aaPredicted RBP8.32□□□□□ -1.08
GMDS-206ENST00000530075 POLR2BP30876 1174 aaKnown RBP8.31□□□□□ -1.08
GMDS-206ENST00000530075 YARSP54577 528 aaKnown RBP8.31□□□□□ -1.08
GMDS-206ENST00000530075 CDCP2Q5VXM1 449 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 DUSP27Q5VZP5 1158 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 FAM181AQ8N9Y4 354 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 DNAJB8Q8NHS0 232 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 TMEM40Q8WWA1 233 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 KIF2CQ99661 725 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 CNNM2Q9H8M5 875 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
GMDS-206ENST00000530075 MEIS3P2A8K0S8 358 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 DNAJA1P31689 397 aaKnown RBP8.3□□□□□ -1.08
GMDS-206ENST00000530075 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
GMDS-206ENST00000530075 MLECQ14165 292 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 CYP27C1Q4G0S4 372 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 SLC43A3Q8NBI5 491 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 CYB5D2Q8WUJ1 264 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
GMDS-206ENST00000530075 MED26O95402 600 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 ACRP10323 421 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 NLRC3Q7RTR2 1065 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 PHACTR4Q8IZ21 702 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 RBBP8NLQ8NC74 664 aaPredicted RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 SHDQ96IW2 340 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 CEP131Q9UPN4 1083 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
GMDS-206ENST00000530075 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
GMDS-206ENST00000530075 PRR33A8MZF0 331 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms