RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-216ENST00000528739 PNMA3Q9UL41 463 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 ZBTB21Q9ULJ3 1066 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 CYP2D6P10635 497 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 OSBPP22059 807 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 LACTBP83111 547 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-216ENST00000528739 PABPC4Q13310 644 aaKnown RBP eCLIP17.19■□□□□ 0.34
CAPN1-216ENST00000528739 ABCB5Q2M3G0 1257 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-216ENST00000528739 TREML2Q5T2D2 321 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 C17orf99Q6UX52 265 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
CAPN1-216ENST00000528739 FEZ1Q99689 392 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
CAPN1-216ENST00000528739 EHD4Q9H223 541 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 GINM1Q9NU53 330 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
CAPN1-216ENST00000528739 USP17L10C9JJH3 530 aa17.18■□□□□ 0.34
CAPN1-216ENST00000528739 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
CAPN1-216ENST00000528739 PSMC4P43686 418 aa17.18■□□□□ 0.34
CAPN1-216ENST00000528739 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-216ENST00000528739 JAG1P78504 1218 aa17.18■□□□□ 0.34
CAPN1-216ENST00000528739 ZYXQ15942 572 aaKnown RBP17.18■□□□□ 0.34
CAPN1-216ENST00000528739 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
CAPN1-216ENST00000528739 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
CAPN1-216ENST00000528739 APPP05067 770 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
CAPN1-216ENST00000528739 HOXD10P28358 340 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 BACE1P56817 501 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 APPBP2Q92624 585 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 WDR18Q9BV38 432 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 LNPKQ9C0E8 428 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 SLC45A1Q9Y2W3 748 aa17.17■□□□□ 0.34
CAPN1-216ENST00000528739 DOCK1Q14185 1865 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 C19orf81C9J6K1 198 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 USP17L12C9JPN9 530 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 USP17L21D6R901 530 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 IRX3P78415 501 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-216ENST00000528739 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 DYNLL2Q96FJ2 89 aa17.16■□□□□ 0.34
CAPN1-216ENST00000528739 CYP2D7A0A087X1C5 515 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 SHMT1P34896 483 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 CAP1Q01518 475 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 EVX2Q03828 476 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 ANKRD13CQ8N6S4 541 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 SWAP70Q9UH65 585 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 PTCH2Q9Y6C5 1203 aa17.15■□□□□ 0.34
CAPN1-216ENST00000528739 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
CAPN1-216ENST00000528739 FCGRTP55899 365 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 SLC9C1Q4G0N8 1177 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 SH3D19Q5HYK7 790 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 NBPF11Q86T75 865 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 SLC44A5Q8NCS7 719 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 RAET1EQ8TD07 263 aa17.14■□□□□ 0.33
CAPN1-216ENST00000528739 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
CAPN1-216ENST00000528739 LAMB1P07942 1786 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 GPAA1O43292 621 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 GNRH1P01148 92 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 IGHDP01880 384 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 TDO2P48775 406 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-216ENST00000528739 SEPT2Q15019 361 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 ASCC2Q9H1I8 757 aaPredicted RBP17.13■□□□□ 0.33
CAPN1-216ENST00000528739 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 MYH1P12882 1939 aa17.13■□□□□ 0.33
CAPN1-216ENST00000528739 M0R2C6 588 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 BCRP11274 1271 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 GNAT2P19087 354 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 USP14P54578 494 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 PDE1AP54750 535 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 GABPAQ06546 454 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 CTR9Q6PD62 1173 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 ARPP21Q9UBL0 812 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-216ENST00000528739 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-216ENST00000528739 ADGRA2Q96PE1 1338 aa17.12■□□□□ 0.33
CAPN1-216ENST00000528739 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
CAPN1-216ENST00000528739 GCLCP48506 637 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-216ENST00000528739 CDK8P49336 464 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 PRMT2P55345 433 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
CAPN1-216ENST00000528739 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
CAPN1-216ENST00000528739 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
CAPN1-216ENST00000528739 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
CAPN1-216ENST00000528739 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms