RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	AS3MT	Q9HBK9	375 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	GINM1	Q9NU53	330 aa		14.19	□□□□□ -0.14
PSMC3-205	ENST00000528362	AK9	Q5TCS8	1911 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	GLRX3	O76003	335 aa	Known RBP	14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	GH2	P01242	217 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	POLR3D	P05423	398 aa	Predicted RBP	14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	CYP2D6	P10635	497 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	SHMT1	P34896	483 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	MTMR2	Q13614	643 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	SH3D19	Q5HYK7	790 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	ANKRD45	Q5TZF3	282 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	PROCA1	Q8NCQ7	364 aa	Predicted RBP	14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	ATP8A2	Q9NTI2	1148 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	PTPN22	Q9Y2R2	807 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	SUPT16H	Q9Y5B9	1047 aa	Known RBP	14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	DOCK1	Q14185	1865 aa		14.18	□□□□□ -0.14
PSMC3-205	ENST00000528362	ERC2	O15083	957 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	SLC34A2	O95436	690 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	BCR	P11274	1271 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	CTGF	P29279	349 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	BACE1	P56817	501 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	OSBP2	Q969R2	916 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	CENPF	P49454	3210 aa		14.17	□□□□□ -0.14
PSMC3-205	ENST00000528362	DDX60L	Q5H9U9	1706 aa	Known RBP	14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	RNF113A	O15541	343 aa	Known RBP	14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	KIF22	Q14807	665 aa		14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	ARHGEF6	Q15052	776 aa		14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	CERKL	Q49MI3	558 aa	Predicted RBP	14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	SLC44A5	Q8NCS7	719 aa		14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	APPBP2	Q92624	585 aa		14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	STRBP	Q96SI9	672 aa	Known RBP	14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	SLC4A4	Q9Y6R1	1079 aa		14.16	□□□□□ -0.14
PSMC3-205	ENST00000528362	FOCAD	Q5VW36	1801 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	USP17L10	C9JJH3	530 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	SMIM22	K7EJ46	135 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	ECM2	O94769	699 aa	Predicted RBP	14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	IGHD	P01880	384 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	ZFY	P08048	801 aa	Predicted RBP	14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	GUCY1A2	P33402	732 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	SOX10	P56693	466 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	ABCB5	Q2M3G0	1257 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	SMC5	Q8IY18	1101 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	SMCR8	Q8TEV9	937 aa	Predicted RBP	14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	DYNLL2	Q96FJ2	89 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	TRIM47	Q96LD4	638 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	STAP2	Q9UGK3	403 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	PTCH2	Q9Y6C5	1203 aa		14.15	□□□□□ -0.14
PSMC3-205	ENST00000528362	CYP2D7	A0A087X1C5	515 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	C19orf81	C9J6K1	198 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	USP17L12	C9JPN9	530 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	USP17L21	D6R901	530 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	PSMC4	P43686	418 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	RAB3GAP1	Q15042	981 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	C12orf60	Q5U649	245 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	ASCC2	Q9H1I8	757 aa	Predicted RBP	14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	RWDD1	Q9H446	243 aa	Predicted RBP	14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	EMILIN3	Q9NT22	766 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	TMOD4	Q9NZQ9	345 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	PNMA3	Q9UL41	463 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	CDK5RAP2	Q96SN8	1893 aa		14.14	□□□□□ -0.15
PSMC3-205	ENST00000528362	TNRC18	O15417	2968 aa	Predicted RBP	14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	GSG1L2	A8MUP6	293 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362		M0R2C6	588 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	GPAA1	O43292	621 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	GNRH1	P01148	92 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	OSBP	P22059	807 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	PDE1A	P54750	535 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	CTR9	Q6PD62	1173 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	ACER1	Q8TDN7	264 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	ARMC5	Q96C12	935 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	DDRGK1	Q96HY6	314 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	FSD1	Q9BTV5	496 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	LNPK	Q9C0E8	428 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	CABP5	Q9NP86	173 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	SWAP70	Q9UH65	585 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	TAOK2	Q9UL54	1235 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	PHIP	Q8WWQ0	1821 aa		14.13	□□□□□ -0.15
PSMC3-205	ENST00000528362	FMNL1	O95466	1100 aa	Predicted RBP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	HOXA7	P31268	230 aa	Predicted RBP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	PABPC4	Q13310	644 aa	Known RBP eCLIP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	SEPT2	Q15019	361 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	ZYX	Q15942	572 aa	Known RBP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	LRRFIP1	Q32MZ4	808 aa	Known RBP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	USP17L2	Q6R6M4	530 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	C16orf86	Q6ZW13	317 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	ANKRD13C	Q8N6S4	541 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	C12orf42	Q96LP6	360 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	FEZ1	Q99689	392 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	KIAA1683	Q9H0B3	1180 aa		14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	14.12	□□□□□ -0.15
PSMC3-205	ENST00000528362	BRCA2	P51587	3418 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	MPHOSPH10	O00566	681 aa	Known RBP	14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	CDK8	P49336	464 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	PRMT2	P55345	433 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	FCGRT	P55899	365 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	IRX3	P78415	501 aa	Predicted RBP	14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	NUCB1	Q02818	461 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	FAM110C	Q1W6H9	321 aa		14.11	□□□□□ -0.15
PSMC3-205	ENST00000528362	ZMYM1	Q5SVZ6	1142 aa		14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms