RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
CHD7-208ENST00000528280 RIOK1Q9BRS2 568 aaKnown RBP11.59□□□□□ -0.55
CHD7-208ENST00000528280 CABP5Q9NP86 173 aa11.59□□□□□ -0.55
CHD7-208ENST00000528280 SAP30BPQ9UHR5 308 aaKnown RBP11.59□□□□□ -0.55
CHD7-208ENST00000528280 CPA4Q9UI42 421 aa11.59□□□□□ -0.55
CHD7-208ENST00000528280 TCRBV5S4A2TA0A5A2 114 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 USP17L10C9JJH3 530 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 ERC2O15083 957 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
CHD7-208ENST00000528280 ADD2P35612 726 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 PSMC4P43686 418 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 FCGRTP55899 365 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 BACE1P56817 501 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
CHD7-208ENST00000528280 ARMC5Q96C12 935 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 RANBP2P49792 3224 aaKnown RBP11.58□□□□□ -0.56
CHD7-208ENST00000528280 MAST2Q6P0Q8 1798 aa11.58□□□□□ -0.56
CHD7-208ENST00000528280 SMARCA5O60264 1052 aaPredicted RBP11.57□□□□□ -0.56
CHD7-208ENST00000528280 BCRP11274 1271 aa11.57□□□□□ -0.56
CHD7-208ENST00000528280 HOXA7P31268 230 aaPredicted RBP11.57□□□□□ -0.56
CHD7-208ENST00000528280 SLC9C1Q4G0N8 1177 aa11.57□□□□□ -0.56
CHD7-208ENST00000528280 YTHDC1Q96MU7 727 aaKnown RBP11.57□□□□□ -0.56
CHD7-208ENST00000528280 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
CHD7-208ENST00000528280 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
CHD7-208ENST00000528280 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
CHD7-208ENST00000528280 SLURP2P0DP57 97 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 CYP2C8P10632 490 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 CAPN2P17655 700 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 USP14P54578 494 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 HMGCS2P54868 508 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 RRP1BQ14684 758 aaKnown RBP11.56□□□□□ -0.56
CHD7-208ENST00000528280 ABCB5Q2M3G0 1257 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 USP17L2Q6R6M4 530 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
CHD7-208ENST00000528280 TRIM47Q96LD4 638 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
CHD7-208ENST00000528280 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 ZBTB21Q9ULJ3 1066 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 ADGRA2Q96PE1 1338 aa11.56□□□□□ -0.56
CHD7-208ENST00000528280 DOCK1Q14185 1865 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 GH2P01242 217 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 PLCD1P51178 756 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 IRX3P78415 501 aaPredicted RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 KBTBD3Q8NAB2 608 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 COA7Q96BR5 231 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 CCDC17Q96LX7 622 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
CHD7-208ENST00000528280 DCP1AQ9NPI6 582 aaPredicted RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
CHD7-208ENST00000528280 MBD4O95243 580 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 GDF11O95390 407 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 CENPBP07199 599 aaPredicted RBP11.54□□□□□ -0.56
CHD7-208ENST00000528280 GNAT2P19087 354 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 MTMR2Q13614 643 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 FAM110CQ1W6H9 321 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 TREML2Q5T2D2 321 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 TICAM2Q86XR7 235 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 LCORLQ8N3X6 602 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 ASCC2Q9H1I8 757 aaPredicted RBP11.54□□□□□ -0.56
CHD7-208ENST00000528280 RWDD1Q9H446 243 aaPredicted RBP11.54□□□□□ -0.56
CHD7-208ENST00000528280 ARMT1Q9H993 441 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
CHD7-208ENST00000528280 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 TNPO2O14787 897 aaKnown RBP11.53□□□□□ -0.56
CHD7-208ENST00000528280 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
CHD7-208ENST00000528280 GRK4P32298 578 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 UBXN2AP68543 259 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 GABPAQ06546 454 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 SLC4A8Q2Y0W8 1093 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 CCDC84Q86UT8 332 aaPredicted RBP11.53□□□□□ -0.56
CHD7-208ENST00000528280 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 SDR42E1Q8WUS8 393 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 APPBP2Q92624 585 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 ZNF333Q96JL9 665 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 CRBNQ96SW2 442 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 FEZ1Q99689 392 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 ARHGAP39Q9C0H5 1083 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 PRO3102Q9H379 93 aa11.53□□□□□ -0.56
CHD7-208ENST00000528280 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms