RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 GUCY2CP25092 1073 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 AKAP17AQ02040 695 aaKnown RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 RILPL1Q5EBL4 403 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ESCO1Q5FWF5 840 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 TBC1D10CQ8IV04 446 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 SPATA20Q8TB22 786 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 RAPGEF4Q8WZA2 1011 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 WASF1Q92558 559 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 NBPF3Q9H094 633 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 UBE2Q2LH0YL09 131 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 GYPCP04921 128 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ADORA1P30542 326 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ZAP70P43403 619 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 MAP9Q49MG5 647 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 DIS3L2Q8IYB7 885 aaKnown RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 DEF6Q9H4E7 631 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
CAPN1-214ENST00000528165 GEMIN8Q9NWZ8 242 aaKnown RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
CAPN1-214ENST00000528165 B4E1Z4 1266 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 ABL1P00519 1130 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 APPP05067 770 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
CAPN1-214ENST00000528165 TMEM94Q12767 1356 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 MMP1P03956 469 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 MCM3P25205 808 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
CAPN1-214ENST00000528165 FECHP22830 423 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SCARF1Q14162 830 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 CDKAL1Q5VV42 579 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 LMOD2Q6P5Q4 547 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 CYP26C1Q6V0L0 522 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 NKX2-3Q8TAU0 364 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 DRC1Q96MC2 740 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.251e-7■■■■□ 21.6
CAPN1-214ENST00000528165 AXIN2Q9Y2T1 843 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SYF2O95926 243 aaKnown RBP16.6■□□□□ 0.25
CAPN1-214ENST00000528165 ARHGAP25P42331 645 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 AMPD2Q01433 879 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 TMEM67Q5HYA8 995 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SMARCC1Q92922 1105 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-214ENST00000528165 FAM217BQ9NTX9 383 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-214ENST00000528165 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
CAPN1-214ENST00000528165 ITIH6Q6UXX5 1313 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SEMA3EO15041 775 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 PHKG2P15735 406 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 ATP2B1P20020 1258 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 ERVK-24P63145 666 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 FAM107BQ9H098 131 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 ABHD10Q9NUJ1 306 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-214ENST00000528165 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 PCDHB6Q9Y5E3 794 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
CAPN1-214ENST00000528165 FMNL1O95466 1100 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 CD44P16070 742 aaKnown RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 AFMP43652 599 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 CUL4BQ13620 913 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 SKIDA1Q1XH10 827 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 USP49Q70CQ1 688 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 TADA2BQ86TJ2 420 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 PRPF6O94906 941 aaKnown RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 USP14P54578 494 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 TAF7LQ5H9L4 462 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 IGDCC4Q8TDY8 1250 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 SLF1Q9BQI6 1058 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 FOXP1Q9H334 677 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-214ENST00000528165 LY9Q9HBG7 655 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 HPCAL4Q9UM19 191 aa16.59■□□□□ 0.25
CAPN1-214ENST00000528165 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.25
CAPN1-214ENST00000528165 CPP00450 1065 aa16.58■□□□□ 0.25
CAPN1-214ENST00000528165 EIF5P55010 431 aaKnown RBP16.58■□□□□ 0.25
CAPN1-214ENST00000528165 SGMS1Q86VZ5 419 aa16.58■□□□□ 0.25
CAPN1-214ENST00000528165 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.25
CAPN1-214ENST00000528165 STIM1Q13586 685 aa16.58■□□□□ 0.24
CAPN1-214ENST00000528165 CCDC57Q2TAC2 916 aa16.58■□□□□ 0.24
CAPN1-214ENST00000528165 GUCA1BQ9UMX6 200 aa16.58■□□□□ 0.24
CAPN1-214ENST00000528165 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
CAPN1-214ENST00000528165 N4BP3O15049 544 aa16.57■□□□□ 0.24
CAPN1-214ENST00000528165 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
CAPN1-214ENST00000528165 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
CAPN1-214ENST00000528165 IFNAR1P17181 557 aa16.57■□□□□ 0.24
CAPN1-214ENST00000528165 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-214ENST00000528165 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms