RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 C19orf81C9J6K1 198 aa21.02■□□□□ 0.96
ATM-213ENST00000527891 IDH1O75874 414 aaKnown RBP21.02■□□□□ 0.96
ATM-213ENST00000527891 GDF11O95390 407 aa21.02■□□□□ 0.96
ATM-213ENST00000527891 TFRCP02786 760 aaKnown RBP21.02■□□□□ 0.96
ATM-213ENST00000527891 HOXA7P31268 230 aaPredicted RBP21.02■□□□□ 0.96
ATM-213ENST00000527891 DYNLL1P63167 89 aaKnown RBP21.02■□□□□ 0.96
ATM-213ENST00000527891 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
ATM-213ENST00000527891 MORF4L1Q9UBU8 362 aa21.02■□□□□ 0.96
ATM-213ENST00000527891 SAP30BPQ9UHR5 308 aaKnown RBP21.02■□□□□ 0.96
ATM-213ENST00000527891 ZBTB21Q9ULJ3 1066 aa21.02■□□□□ 0.96
ATM-213ENST00000527891 CDK5RAP2Q96SN8 1893 aa21.01■□□□□ 0.95
ATM-213ENST00000527891 USP17L10C9JJH3 530 aa21.01■□□□□ 0.95
ATM-213ENST00000527891 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
ATM-213ENST00000527891 NR2E3Q9Y5X4 410 aa21.01■□□□□ 0.95
ATM-213ENST00000527891 HMGCRP04035 888 aa21■□□□□ 0.95
ATM-213ENST00000527891 SHROOM1Q2M3G4 852 aaPredicted RBP21■□□□□ 0.95
ATM-213ENST00000527891 MIGA1Q8NAN2 632 aa21■□□□□ 0.95
ATM-213ENST00000527891 CRISPLD2Q9H0B8 497 aa21■□□□□ 0.95
ATM-213ENST00000527891 XRN2Q9H0D6 950 aaKnown RBP eCLIP21■□□□□ 0.95
ATM-213ENST00000527891 GJD2Q9UKL4 321 aa21■□□□□ 0.95
ATM-213ENST00000527891 MYO5AQ9Y4I1 1855 aaKnown RBP20.99■□□□□ 0.95
ATM-213ENST00000527891 HERVK_113P62684 666 aa20.99■□□□□ 0.95
ATM-213ENST00000527891 ERC1Q8IUD2 1116 aa20.99■□□□□ 0.95
ATM-213ENST00000527891 MAGEB6Q8N7X4 407 aa20.99■□□□□ 0.95
ATM-213ENST00000527891 P2RX7Q99572 595 aaKnown RBP20.99■□□□□ 0.95
ATM-213ENST00000527891 USP5P45974 858 aa20.98■□□□□ 0.95
ATM-213ENST00000527891 MAP3K12Q12852 859 aa20.98■□□□□ 0.95
ATM-213ENST00000527891 TMED8Q6PL24 325 aaPredicted RBP20.98■□□□□ 0.95
ATM-213ENST00000527891 ANTXR1Q9H6X2 564 aa20.98■□□□□ 0.95
ATM-213ENST00000527891 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
ATM-213ENST00000527891 EXOC6BQ9Y2D4 811 aa20.98■□□□□ 0.95
ATM-213ENST00000527891 NDUFB9Q9Y6M9 179 aa20.98■□□□□ 0.95
ATM-213ENST00000527891 AACSQ86V21 672 aa20.97■□□□□ 0.95
ATM-213ENST00000527891 MIER1Q8N108 512 aa20.97■□□□□ 0.95
ATM-213ENST00000527891 GPRC5AQ8NFJ5 357 aa20.97■□□□□ 0.95
ATM-213ENST00000527891 TXNRD2Q9NNW7 524 aa20.97■□□□□ 0.95
ATM-213ENST00000527891 DOCK3Q8IZD9 2030 aa20.97■□□□□ 0.95
ATM-213ENST00000527891 RANBP2P49792 3224 aaKnown RBP20.96■□□□□ 0.95
ATM-213ENST00000527891 EVI5O60447 810 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 GH2P01242 217 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 USP17L2Q6R6M4 530 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 GTF3C2Q8WUA4 911 aaPredicted RBP20.96■□□□□ 0.95
ATM-213ENST00000527891 SOCS4Q8WXH5 440 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 EHD4Q9H223 541 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 HMX1Q9NP08 348 aaPredicted RBP20.96■□□□□ 0.95
ATM-213ENST00000527891 EMILIN3Q9NT22 766 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 RPTORQ8N122 1335 aa20.96■□□□□ 0.95
ATM-213ENST00000527891 CEP290O15078 2479 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 PEX10O60683 326 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 TRIM32Q13049 653 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 TATDN1Q6P1N9 297 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 NECAB2Q7Z6G3 386 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 ANKLE1Q8NAG6 615 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 PANK1Q8TE04 598 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 TRIB2Q92519 343 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 PAWRQ96IZ0 340 aaKnown RBP20.95■□□□□ 0.94
ATM-213ENST00000527891 NUDT12Q9BQG2 462 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 PRO3102Q9H379 93 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 RBPJLQ9UBG7 517 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 SERPINB13Q9UIV8 391 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
ATM-213ENST00000527891 CYP2B6P20813 491 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 MAPK4P31152 587 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 ERVK-9P63128 1117 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 ERVK-24P63145 666 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 HSP90AB4PQ58FF6 505 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 TTC6Q86TZ1 520 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 SZT2Q5T011 3432 aa20.94■□□□□ 0.94
ATM-213ENST00000527891 PDE3AQ14432 1141 aa20.93■□□□□ 0.94
ATM-213ENST00000527891 DIS3LQ8TF46 1054 aaKnown RBP20.93■□□□□ 0.94
ATM-213ENST00000527891 C12orf42Q96LP6 360 aa20.93■□□□□ 0.94
ATM-213ENST00000527891 FEZ1Q99689 392 aa20.93■□□□□ 0.94
ATM-213ENST00000527891 PAGR1Q9BTK6 254 aa20.93■□□□□ 0.94
ATM-213ENST00000527891 IL1RAPL2Q9NP60 686 aa20.93■□□□□ 0.94
ATM-213ENST00000527891 PLXNB2O15031 1838 aa20.92■□□□□ 0.94
ATM-213ENST00000527891 MYH1P12882 1939 aa20.92■□□□□ 0.94
ATM-213ENST00000527891 XRCC5P13010 732 aaKnown RBP20.92■□□□□ 0.94
ATM-213ENST00000527891 TTF1Q15361 905 aaPredicted RBP20.92■□□□□ 0.94
ATM-213ENST00000527891 CERKLQ49MI3 558 aaPredicted RBP20.92■□□□□ 0.94
ATM-213ENST00000527891 CCAR1Q8IX12 1150 aaKnown RBP20.92■□□□□ 0.94
ATM-213ENST00000527891 RHPN1Q8TCX5 695 aa20.92■□□□□ 0.94
ATM-213ENST00000527891 RIOK1Q9BRS2 568 aaKnown RBP20.92■□□□□ 0.94
ATM-213ENST00000527891 USP14P54578 494 aa20.91■□□□□ 0.94
ATM-213ENST00000527891 RAB3GAP1Q15042 981 aa20.91■□□□□ 0.94
ATM-213ENST00000527891 ZYXQ15942 572 aaKnown RBP20.91■□□□□ 0.94
ATM-213ENST00000527891 Q3C1V9 767 aa20.91■□□□□ 0.94
ATM-213ENST00000527891 MAP3K21Q5TCX8 1036 aa20.91■□□□□ 0.94
ATM-213ENST00000527891 TRMT44Q8IYL2 757 aaKnown RBP20.91■□□□□ 0.94
ATM-213ENST00000527891 PORCNQ9H237 461 aa20.91■□□□□ 0.94
ATM-213ENST00000527891 TRIOBPQ9H2D6 2365 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 MAGEB6P1A0A0J9YX57 407 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L15C9J2P7 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L13C9JLJ4 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L11C9JVI0 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L18D6R9N7 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L22D6RA61 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L17D6RBQ6 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L19D6RCP7 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
ATM-213ENST00000527891 MS4A1P11836 297 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms