RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IRF5Q13568 498 aa27.27■■□□□ 1.96
TRAPPC4-208ENST00000527680 HSP90AB4PQ58FF6 505 aa27.27■■□□□ 1.96
TRAPPC4-208ENST00000527680 U2AF1L4Q8WU68 220 aaKnown RBP27.27■■□□□ 1.96
TRAPPC4-208ENST00000527680 JAG1P78504 1218 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 CERS3Q8IU89 383 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 ANTXR1Q9H6X2 564 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 DNAJC18Q9H819 358 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 IL1RAPL2Q9NP60 686 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 GINM1Q9NU53 330 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 MAST2Q6P0Q8 1798 aa27.26■■□□□ 1.95
TRAPPC4-208ENST00000527680 C19orf81C9J6K1 198 aa27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 USP17L10C9JJH3 530 aa27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 H0YGN5 161 aa27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 APBB1O00213 710 aa27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 SGPL1O95470 568 aa27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 TFRCP02786 760 aaKnown RBP27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 METTL16Q86W50 562 aaKnown RBP27.25■■□□□ 1.95
TRAPPC4-208ENST00000527680 CDK5RAP2Q96SN8 1893 aa27.24■■□□□ 1.95
TRAPPC4-208ENST00000527680 HTATIP2Q9BUP3 242 aa27.24■■□□□ 1.95
TRAPPC4-208ENST00000527680 SHROOM1Q2M3G4 852 aaPredicted RBP27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 RHPN1Q8TCX5 695 aa27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 DEFB118Q96PH6 123 aa27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 P2RX7Q99572 595 aaKnown RBP27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 ZBTB21Q9ULJ3 1066 aa27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 COLQQ9Y215 455 aaPredicted RBP27.23■■□□□ 1.95
TRAPPC4-208ENST00000527680 SIPA1L1O43166 1804 aa27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 FARP2O94887 1054 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 HOXA7P31268 230 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 TTC6Q86TZ1 520 aa27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 CLASRPQ8N2M8 674 aaKnown RBP27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 LOC285556D6RIA3 1793 aa27.21■■□□□ 1.95
TRAPPC4-208ENST00000527680 FOCADQ5VW36 1801 aa27.2■■□□□ 1.95
TRAPPC4-208ENST00000527680 MYH1P12882 1939 aa27.2■■□□□ 1.95
TRAPPC4-208ENST00000527680 HMMRO75330 724 aa27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 GH2P01242 217 aa27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 TTF1Q15361 905 aaPredicted RBP27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 CCAR1Q8IX12 1150 aaKnown RBP27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 RPAP2Q8IXW5 612 aaPredicted RBP27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 SERPINB13Q9UIV8 391 aa27.2■■□□□ 1.94
TRAPPC4-208ENST00000527680 IFIT2P09913 472 aaKnown RBP27.19■■□□□ 1.94
TRAPPC4-208ENST00000527680 TMED8Q6PL24 325 aaPredicted RBP27.19■■□□□ 1.94
TRAPPC4-208ENST00000527680 USP17L2Q6R6M4 530 aa27.19■■□□□ 1.94
TRAPPC4-208ENST00000527680 GPRC5AQ8NFJ5 357 aa27.19■■□□□ 1.94
TRAPPC4-208ENST00000527680 COG6Q9Y2V7 657 aa27.19■■□□□ 1.94
TRAPPC4-208ENST00000527680 MAGEB6P1A0A0J9YX57 407 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 HERVK_113P62684 666 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 KIF1BPQ96EK5 621 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 FEZ1Q99689 392 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 MORF4L1Q9UBU8 362 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 DDX19BQ9UMR2 479 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 CEP290O15078 2479 aa27.18■■□□□ 1.94
TRAPPC4-208ENST00000527680 POLR3DP05423 398 aaPredicted RBP27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 RAB3GAP1Q15042 981 aa27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 ZYXQ15942 572 aaKnown RBP27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 CERKLQ49MI3 558 aaPredicted RBP27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 SLC9C2Q5TAH2 1124 aa27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 GJD2Q9UKL4 321 aa27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 NR2E3Q9Y5X4 410 aa27.17■■□□□ 1.94
TRAPPC4-208ENST00000527680 PEX10O60683 326 aa27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 CAPN2P17655 700 aa27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 UBE2Q1Q7Z7E8 422 aa27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 DNAJC2Q99543 621 aaKnown RBP27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 CABP5Q9NP86 173 aa27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 EMILIN3Q9NT22 766 aa27.16■■□□□ 1.94
TRAPPC4-208ENST00000527680 HMGCRP04035 888 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 CYP2B6P20813 491 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 ABCB5Q2M3G0 1257 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 TATDN1Q6P1N9 297 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 PAGR1Q9BTK6 254 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 EHD4Q9H223 541 aa27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 PAK6Q9NQU5 681 aaPredicted RBP27.15■■□□□ 1.94
TRAPPC4-208ENST00000527680 GOLIM4O00461 696 aa27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 CHRDL2Q6WN34 429 aa27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 NUDT12Q9BQG2 462 aa27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 CRNKL1Q9BZJ0 848 aaKnown RBP27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 CHMP4BQ9H444 224 aaKnown RBP27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 CWC22Q9HCG8 908 aaKnown RBP27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 TXNRD2Q9NNW7 524 aa27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 HMX1Q9NP08 348 aaPredicted RBP27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 RBPJLQ9UBG7 517 aa27.14■■□□□ 1.94
TRAPPC4-208ENST00000527680 PDE6AP16499 860 aa27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 PLCD1P51178 756 aa27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 PDE3AQ14432 1141 aa27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 GTF3C2Q8WUA4 911 aaPredicted RBP27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 RIOK1Q9BRS2 568 aaKnown RBP27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 ZBTB40Q9NUA8 1239 aa27.13■■□□□ 1.93
TRAPPC4-208ENST00000527680 RAB11FIP3O75154 756 aa27.12■■□□□ 1.93
TRAPPC4-208ENST00000527680 MAPK4P31152 587 aa27.12■■□□□ 1.93
TRAPPC4-208ENST00000527680 Q3C1V9 767 aa27.12■■□□□ 1.93
TRAPPC4-208ENST00000527680 MCM9Q9NXL9 1143 aa27.12■■□□□ 1.93
TRAPPC4-208ENST00000527680 RPTORQ8N122 1335 aa27.12■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L15C9J2P7 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L13C9JLJ4 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L11C9JVI0 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L18D6R9N7 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L22D6RA61 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L17D6RBQ6 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L19D6RCP7 530 aa27.11■■□□□ 1.93
TRAPPC4-208ENST00000527680 USP17L20D6RJB6 530 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms