RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 ZNF444Q8N0Y2 327 aaPredicted RBP18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 DYNLL2Q96FJ2 89 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 PDLIM2Q96JY6 352 aa18.82■□□□□ 0.6
SNRNP35-204ENST00000527158 DDAH1O94760 285 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 TFAP4Q01664 338 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 CCDC178Q5BJE1 867 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 CCDC183Q5T5S1 534 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 RBM28Q9NW13 759 aaKnown RBP18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 SLX4Q8IY92 1834 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 PLCD1P51178 756 aa18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
SNRNP35-204ENST00000527158 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 STRIP1Q5VSL9 837 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 KRT40Q6A162 431 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 CCDC125Q86Z20 511 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 AIFM3Q96NN9 605 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 MXD3Q9BW11 206 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 GJB4Q9NTQ9 266 aa18.8■□□□□ 0.6
SNRNP35-204ENST00000527158 ECE2O60344 883 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 NMT2O60551 498 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 DEXIO95424 95 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TPM2P07951 284 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 FKBP1AP62942 108 aaKnown RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 CEBPZQ03701 1054 aaKnown RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 HHIPL2Q6UWX4 724 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 DGKHQ86XP1 1220 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 CCDC82Q8N4S0 544 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TEKT1Q969V4 418 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 RCOR1Q9UKL0 485 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 C10orf71Q711Q0 1435 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 AKAP17AQ02040 695 aaKnown RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TROAPQ12815 778 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 GNL2Q13823 731 aaKnown RBP18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 NBPF11Q86T75 865 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 TTLL6Q8N841 843 aa18.79■□□□□ 0.6
SNRNP35-204ENST00000527158 NAV1Q8NEY1 1877 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 SCNN1DP51172 638 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 USP28Q96RU2 1077 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 RBSNQ9H1K0 784 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 TAOK2Q9UL54 1235 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 C21orf2O43822 256 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 TERF1P54274 439 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 KIAA2012Q0VF49 1180 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 C16orf86Q6ZW13 317 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 RNF26Q9BY78 433 aaPredicted RBP18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 KAT14Q9H8E8 782 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 USP40Q9NVE5 1235 aa18.78■□□□□ 0.6
SNRNP35-204ENST00000527158 USP17L3A6NCW0 530 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 USP17L4A6NCW7 530 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 AOC3Q16853 763 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 USP17L1Q7RTZ2 530 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 CMTR1Q8N1G2 835 aaKnown RBP18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 MRIQ9BWK5 157 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 KCNQ5Q9NR82 932 aa18.77■□□□□ 0.6
SNRNP35-204ENST00000527158 CDK8P49336 464 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 PICALMQ13492 652 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 SAFBQ15424 915 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 MYSM1Q5VVJ2 828 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 BICD2Q8TD16 824 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 ANKS1AQ92625 1134 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 DACT2Q5SW24 774 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 RCSD1Q6JBY9 416 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 SLC44A5Q8NCS7 719 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 IL17RBQ9NRM6 502 aa18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 NOL7Q9UMY1 257 aaKnown RBP18.76■□□□□ 0.59
SNRNP35-204ENST00000527158 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 XBP1P17861 261 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 RASA1P20936 1047 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 KIF5BP33176 963 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 GUCY1A2P33402 732 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 CRKP46108 304 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 PGBD1Q96JS3 809 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 DLEC1Q9Y238 1755 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 PPIP5K2O43314 1243 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 HDLBPQ00341 1268 aaKnown RBP18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 KIAA0825Q8IV33 1275 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 POLR3EQ9NVU0 708 aa18.75■□□□□ 0.59
SNRNP35-204ENST00000527158 UBE2Q2LH0YL09 131 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 WDHD1O75717 1129 aaPredicted RBP18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 U2AF2P26368 475 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 APOBEC3HQ6NTF7 200 aaKnown RBP18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 TMTC3Q6ZXV5 915 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 ZDHHC15Q96MV8 337 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 MMP1P03956 469 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 DPEP1P16444 411 aa18.74■□□□□ 0.59
SNRNP35-204ENST00000527158 CDC42EP5Q6NZY7 148 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms