RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 ZKSCAN2Q63HK3 967 aa22.98■■□□□ 1.27
CAPN1-206ENST00000526966 FOXP4Q8IVH2 680 aaPredicted RBP22.98■■□□□ 1.27
CAPN1-206ENST00000526966 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
CAPN1-206ENST00000526966 PAWRQ96IZ0 340 aaKnown RBP22.98■■□□□ 1.27
CAPN1-206ENST00000526966 GINM1Q9NU53 330 aa22.98■■□□□ 1.27
CAPN1-206ENST00000526966 IRX3P78415 501 aaPredicted RBP22.97■■□□□ 1.27
CAPN1-206ENST00000526966 TMOD4Q9NZQ9 345 aa22.97■■□□□ 1.27
CAPN1-206ENST00000526966 RPTORQ8N122 1335 aa22.97■■□□□ 1.27
CAPN1-206ENST00000526966 C19orf81C9J6K1 198 aa22.96■■□□□ 1.27
CAPN1-206ENST00000526966 ZAP70P43403 619 aa22.96■■□□□ 1.27
CAPN1-206ENST00000526966 SHROOM1Q2M3G4 852 aaPredicted RBP22.96■■□□□ 1.27
CAPN1-206ENST00000526966 NECAB2Q7Z6G3 386 aa22.96■■□□□ 1.27
CAPN1-206ENST00000526966 DIS3LQ8TF46 1054 aaKnown RBP22.96■■□□□ 1.27
CAPN1-206ENST00000526966 PALD1Q9ULE6 856 aa22.96■■□□□ 1.27
CAPN1-206ENST00000526966 ZBTB21Q9ULJ3 1066 aa22.96■■□□□ 1.27
CAPN1-206ENST00000526966 HERVK_113P62684 666 aa22.95■■□□□ 1.26
CAPN1-206ENST00000526966 TRIM32Q13049 653 aa22.95■■□□□ 1.26
CAPN1-206ENST00000526966 OS9Q13438 667 aaPredicted RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 CRACR2BQ8N4Y2 399 aaPredicted RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 TRIB2Q92519 343 aa22.95■■□□□ 1.26
CAPN1-206ENST00000526966 P2RX7Q99572 595 aaKnown RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 TXNRD2Q9NNW7 524 aa22.95■■□□□ 1.26
CAPN1-206ENST00000526966 HMX1Q9NP08 348 aaPredicted RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 PIH1D3Q9NQM4 214 aaKnown RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 DBNLQ9UJU6 430 aaKnown RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
CAPN1-206ENST00000526966 USP17L10C9JJH3 530 aa22.94■■□□□ 1.26
CAPN1-206ENST00000526966 SURF6O75683 361 aaKnown RBP22.94■■□□□ 1.26
CAPN1-206ENST00000526966 GDF11O95390 407 aa22.94■■□□□ 1.26
CAPN1-206ENST00000526966 MAP3K21Q5TCX8 1036 aa22.94■■□□□ 1.26
CAPN1-206ENST00000526966 MNX1P50219 401 aaPredicted RBP22.93■■□□□ 1.26
CAPN1-206ENST00000526966 SOCS4Q8WXH5 440 aa22.93■■□□□ 1.26
CAPN1-206ENST00000526966 TRIM34Q9BYJ4 488 aa22.93■■□□□ 1.26
CAPN1-206ENST00000526966 TLR7Q9NYK1 1049 aaKnown RBP22.93■■□□□ 1.26
CAPN1-206ENST00000526966 PEX10O60683 326 aa22.92■■□□□ 1.26
CAPN1-206ENST00000526966 HLA-DOAP06340 250 aa22.92■■□□□ 1.26
CAPN1-206ENST00000526966 XRCC5P13010 732 aaKnown RBP22.92■■□□□ 1.26
CAPN1-206ENST00000526966 DYNLL1P63167 89 aaKnown RBP22.92■■□□□ 1.26
CAPN1-206ENST00000526966 GPRC5AQ8NFJ5 357 aa22.92■■□□□ 1.26
CAPN1-206ENST00000526966 C1orf115Q9H7X2 142 aa22.92■■□□□ 1.26
CAPN1-206ENST00000526966 RBPJLQ9UBG7 517 aa22.92■■□□□ 1.26
CAPN1-206ENST00000526966 SAP30BPQ9UHR5 308 aaKnown RBP22.92■■□□□ 1.26
CAPN1-206ENST00000526966 CYP2B6P20813 491 aa22.91■■□□□ 1.26
CAPN1-206ENST00000526966 GTF3C2Q8WUA4 911 aaPredicted RBP22.91■■□□□ 1.26
CAPN1-206ENST00000526966 NUDT12Q9BQG2 462 aa22.91■■□□□ 1.26
CAPN1-206ENST00000526966 EMILIN3Q9NT22 766 aa22.91■■□□□ 1.26
CAPN1-206ENST00000526966 OGDHLQ9ULD0 1010 aa22.91■■□□□ 1.26
CAPN1-206ENST00000526966 FRMPD3Q5JV73 1810 aa22.91■■□□□ 1.26
CAPN1-206ENST00000526966 CYP7A1P22680 504 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 MAPK4P31152 587 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 POTEEQ6S8J3 1075 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 CERS3Q8IU89 383 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 USP6NLQ92738 828 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 EAF2Q96CJ1 260 aaPredicted RBP22.9■■□□□ 1.26
CAPN1-206ENST00000526966 NBPF3Q9H094 633 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 STAP2Q9UGK3 403 aa22.9■■□□□ 1.26
CAPN1-206ENST00000526966 PRKAR2AP13861 404 aaKnown RBP22.89■■□□□ 1.25
CAPN1-206ENST00000526966 ERVK-9P63128 1117 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 ERVK-24P63145 666 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 C12orf42Q96LP6 360 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 GDF15Q99988 308 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 CCDC8Q9H0W5 538 aaPredicted RBP22.89■■□□□ 1.25
CAPN1-206ENST00000526966 COL6A3P12111 3177 aa22.89■■□□□ 1.25
CAPN1-206ENST00000526966 NAV1Q8NEY1 1877 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 SOX1O00570 391 aaPredicted RBP22.88■■□□□ 1.25
CAPN1-206ENST00000526966 GH2P01242 217 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 Q3C1V9 767 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 USP17L2Q6R6M4 530 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 TRMT44Q8IYL2 757 aaKnown RBP22.88■■□□□ 1.25
CAPN1-206ENST00000526966 EHD4Q9H223 541 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 PORCNQ9H237 461 aa22.88■■□□□ 1.25
CAPN1-206ENST00000526966 IDH1O75874 414 aaKnown RBP22.87■■□□□ 1.25
CAPN1-206ENST00000526966 RLBP1P12271 317 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 BMP8BP34820 402 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 PDE3AQ14432 1141 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 MORN1Q5T089 497 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 TMED8Q6PL24 325 aaPredicted RBP22.87■■□□□ 1.25
CAPN1-206ENST00000526966 GPR142Q7Z601 462 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 FTSJ3Q8IY81 847 aaKnown RBP22.87■■□□□ 1.25
CAPN1-206ENST00000526966 C7orf61Q8IZ16 206 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 MIGA1Q8NAN2 632 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 C11orf49Q9H6J7 331 aa22.87■■□□□ 1.25
CAPN1-206ENST00000526966 ZKSCAN1P17029 563 aaPredicted RBP22.86■■□□□ 1.25
CAPN1-206ENST00000526966 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
CAPN1-206ENST00000526966 MAGEB6Q8N7X4 407 aa22.86■■□□□ 1.25
CAPN1-206ENST00000526966 PAGR1Q9BTK6 254 aa22.86■■□□□ 1.25
CAPN1-206ENST00000526966 SERPINB13Q9UIV8 391 aa22.86■■□□□ 1.25
CAPN1-206ENST00000526966 PFASO15067 1338 aa22.85■■□□□ 1.25
CAPN1-206ENST00000526966 CACNB2Q08289 660 aaPredicted RBP22.85■■□□□ 1.25
CAPN1-206ENST00000526966 ANTXR1Q9H6X2 564 aa22.85■■□□□ 1.25
CAPN1-206ENST00000526966 RGS2P41220 211 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 USP5P45974 858 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 CEP85Q6P2H3 762 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 PLEKHH3Q7Z736 793 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 LRCH3Q96II8 777 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 APBA2Q99767 749 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 ZMYND8Q9ULU4 1186 aaPredicted RBP22.84■■□□□ 1.25
CAPN1-206ENST00000526966 RABGAP1Q9Y3P9 1069 aa22.84■■□□□ 1.25
CAPN1-206ENST00000526966 NDUFB9Q9Y6M9 179 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms