RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 LPAR1Q92633 364 aa13.38□□□□□ -0.27
CTSB-212ENST00000526645 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
CTSB-212ENST00000526645 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
CTSB-212ENST00000526645 RTP1P59025 263 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 CCNA1P78396 465 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 MYLIPQ8WY64 445 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 SIL1Q9H173 461 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 PORCNQ9H237 461 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
CTSB-212ENST00000526645 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
CTSB-212ENST00000526645 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 COL9A1P20849 921 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
CTSB-212ENST00000526645 MVPQ14764 893 aaKnown RBP13.36□□□□□ -0.27
CTSB-212ENST00000526645 SHHQ15465 462 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 EDC3Q96F86 508 aaKnown RBP13.36□□□□□ -0.27
CTSB-212ENST00000526645 PAGR1Q9BTK6 254 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
CTSB-212ENST00000526645 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
CTSB-212ENST00000526645 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
CTSB-212ENST00000526645 RLFQ13129 1914 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 TNFRSF10AO00220 468 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 HOXC6P09630 235 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 ADORA1P30542 326 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 RRP1BQ14684 758 aaKnown RBP13.35□□□□□ -0.27
CTSB-212ENST00000526645 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
CTSB-212ENST00000526645 ARRDC4Q8NCT1 418 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 TTYH1Q9H313 450 aaPredicted RBP13.35□□□□□ -0.27
CTSB-212ENST00000526645 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 ATP11BQ9Y2G3 1177 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
CTSB-212ENST00000526645 ZNF236Q9UL36 1845 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 SLC15A5A6NIM6 579 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 KBTBD13C9JR72 458 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
CTSB-212ENST00000526645 SNX17Q15036 470 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 Q3C1V9 767 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 C9orf50Q5SZB4 431 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 TEX11Q8IYF3 940 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 NSUN4Q96CB9 384 aaKnown RBP13.34□□□□□ -0.27
CTSB-212ENST00000526645 NOL10Q9BSC4 688 aaKnown RBP13.34□□□□□ -0.27
CTSB-212ENST00000526645 AKAP2Q9Y2D5 859 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
CTSB-212ENST00000526645 PRUNE2Q8WUY3 3088 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 PEX10O60683 326 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 CNGA1P29973 690 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 ATP2B2Q01814 1243 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 METTL16Q86W50 562 aaKnown RBP13.33□□□□□ -0.28
CTSB-212ENST00000526645 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 TRIM34Q9BYJ4 488 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.28
CTSB-212ENST00000526645 ZBTB21Q9ULJ3 1066 aa13.33□□□□□ -0.28
CTSB-212ENST00000526645 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 A0A1B0GUL7 405 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 PLCG2P16885 1265 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 PTPREP23469 700 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 GRB14Q14449 540 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 C1orf53Q5VUE5 145 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 USP17L2Q6R6M4 530 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 LBX2Q6XYB7 198 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 SLC39A5Q6ZMH5 540 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 FOXP4Q8IVH2 680 aaPredicted RBP13.32□□□□□ -0.28
CTSB-212ENST00000526645 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
CTSB-212ENST00000526645 BADQ92934 168 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
CTSB-212ENST00000526645 DNAH12Q6ZR08 3092 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 BAG3O95817 575 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 CYBAP13498 195 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 WDR78Q5VTH9 848 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 MRS2Q9HD23 443 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 HMG20BQ9P0W2 317 aa13.31□□□□□ -0.28
CTSB-212ENST00000526645 PLA2G5P39877 138 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 USP14P54578 494 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 TIMM10P62072 90 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 TRIM60Q495X7 471 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
CTSB-212ENST00000526645 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
CTSB-212ENST00000526645 EMILIN3Q9NT22 766 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms