RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 SURF6O75683 361 aaKnown RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 GH2P01242 217 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 MYCNP04198 464 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 CYP2E1P05181 493 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 UQCRFS1P1P0C7P4 283 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 CYP7A1P22680 504 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 ARID4AP29374 1257 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 CNGA1P29973 690 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 HERVK_113P62684 666 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 CACNB2Q08289 660 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 CCDC158Q5M9N0 1113 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 POTEEQ6S8J3 1075 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 SAMD1Q6SPF0 538 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 FOXP4Q8IVH2 680 aaPredicted RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 FAM161BQ96MY7 647 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 CENPFP49454 3210 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 RFX7Q2KHR2 1363 aa8.07□□□□□ -1.12
CD44-221ENST00000526000 RBBP6Q7Z6E9 1792 aaKnown RBP8.07□□□□□ -1.12
CD44-221ENST00000526000 MYH2Q9UKX2 1941 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 IPO8O15397 1037 aaKnown RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 NPM3O75607 178 aaKnown RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 IDH1O75874 414 aaKnown RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 ASNSP08243 561 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 TRIM27P14373 513 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 ZKSCAN1P17029 563 aaPredicted RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 USP5P45974 858 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 ATN1P54259 1190 aaPredicted RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 LRRC26Q2I0M4 334 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 ANO1Q5XXA6 986 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 GPR142Q7Z601 462 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 TMEM57Q8N5G2 664 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 ACER1Q8TDN7 264 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 FEZ1Q99689 392 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 TLR7Q9NYK1 1049 aaKnown RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 MORF4L1Q9UBU8 362 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 HERC5Q9UII4 1024 aaKnown RBP8.06□□□□□ -1.12
CD44-221ENST00000526000 OGDHLQ9ULD0 1010 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 ZBTB21Q9ULJ3 1066 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 FPGT-TNNI3KV9GXZ4 949 aa8.06□□□□□ -1.12
CD44-221ENST00000526000 PDS5AQ29RF7 1337 aaKnown RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 MYH13Q9UKX3 1938 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 C19orf81C9J6K1 198 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 CT47B1P0C2W7 299 aaPredicted RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 HOXA7P31268 230 aaPredicted RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 PPP4CP60510 307 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 ERVK-9P63128 1117 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 ERVK-24P63145 666 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 ATP8B2P98198 1209 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 MTX1Q13505 466 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 PLEKHH3Q7Z736 793 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 MAGEB6Q8N7X4 407 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 ANKLE1Q8NAG6 615 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 ARHGAP45Q92619 1136 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 EDC3Q96F86 508 aaKnown RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 SENP6Q9GZR1 1112 aaPredicted RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 DHX36Q9H2U1 1008 aaKnown RBP8.05□□□□□ -1.12
CD44-221ENST00000526000 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 FLRT1Q9NZU1 646 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 LAMB1P07942 1786 aa8.05□□□□□ -1.12
CD44-221ENST00000526000 PFASO15067 1338 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 FLT1P17948 1338 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 A0A1W2PPC1 479 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 APBB1O00213 710 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 CNMDO75829 334 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 MAP4K4O95819 1239 aaPredicted RBP8.04□□□□□ -1.12
CD44-221ENST00000526000 HLA-DOAP06340 250 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 PLCG2P16885 1265 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 MAPK4P31152 587 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 CYP2C19P33261 490 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 BMP8BP34820 402 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 RGS2P41220 211 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 ATP2B2Q01814 1243 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 EVX2Q03828 476 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 MORN1Q5T089 497 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 LHX8Q68G74 356 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 ATF7IPQ6VMQ6 1270 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 NPLOC4Q8TAT6 608 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 USP6NLQ92738 828 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 EAF2Q96CJ1 260 aaPredicted RBP8.04□□□□□ -1.12
CD44-221ENST00000526000 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 MTMR10Q9NXD2 777 aa8.04□□□□□ -1.12
CD44-221ENST00000526000 USP17L15C9J2P7 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L13C9JLJ4 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L11C9JVI0 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L18D6R9N7 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L22D6RA61 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L17D6RBQ6 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L19D6RCP7 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 USP17L20D6RJB6 530 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 MPHOSPH10O00566 681 aaKnown RBP8.03□□□□□ -1.12
CD44-221ENST00000526000 ZBTB22O15209 634 aa8.03□□□□□ -1.12
CD44-221ENST00000526000 POLR3DP05423 398 aaPredicted RBP8.03□□□□□ -1.12
CD44-221ENST00000526000 PLCD1P51178 756 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms