RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 ZNF576Q9H609 170 aa8.8□□□□□ -1
SSH3-204ENST00000525913 CHD9Q3L8U1 2897 aa8.8□□□□□ -1
SSH3-204ENST00000525913 SIPA1L1O43166 1804 aa8.8□□□□□ -1
SSH3-204ENST00000525913 USP17L5A8MUK1 530 aa8.79□□□□□ -1
SSH3-204ENST00000525913 NPM3O75607 178 aaKnown RBP8.79□□□□□ -1
SSH3-204ENST00000525913 CNMDO75829 334 aa8.79□□□□□ -1
SSH3-204ENST00000525913 BMP1P13497 986 aa8.79□□□□□ -1
SSH3-204ENST00000525913 RFX5P48382 616 aaPredicted RBP8.79□□□□□ -1
SSH3-204ENST00000525913 BACE1P56817 501 aa8.79□□□□□ -1
SSH3-204ENST00000525913 CCDC27Q2M243 656 aa8.79□□□□□ -1
SSH3-204ENST00000525913 TRIM60Q495X7 471 aa8.79□□□□□ -1
SSH3-204ENST00000525913 AKNAD1Q5T1N1 836 aa8.79□□□□□ -1
SSH3-204ENST00000525913 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
SSH3-204ENST00000525913 PLEKHH3Q7Z736 793 aa8.79□□□□□ -1
SSH3-204ENST00000525913 WWC1Q8IX03 1113 aa8.79□□□□□ -1
SSH3-204ENST00000525913 NPLOC4Q8TAT6 608 aa8.79□□□□□ -1
SSH3-204ENST00000525913 LPIN2Q92539 896 aa8.79□□□□□ -1
SSH3-204ENST00000525913 APBA2Q99767 749 aa8.79□□□□□ -1
SSH3-204ENST00000525913 LRFN3Q9BTN0 628 aa8.79□□□□□ -1
SSH3-204ENST00000525913 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.79□□□□□ -1
SSH3-204ENST00000525913 ZNFX1Q9P2E3 1918 aaKnown RBP8.79□□□□□ -1
SSH3-204ENST00000525913 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
SSH3-204ENST00000525913 BDP1A6H8Y1 2624 aa8.78□□□□□ -1
SSH3-204ENST00000525913 GPR75-ASB3A0A0A6YYF3 556 aa8.78□□□□□ -1
SSH3-204ENST00000525913 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.78□□□□□ -1
SSH3-204ENST00000525913 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.78□□□□□ -1
SSH3-204ENST00000525913 MSCO60682 206 aa8.78□□□□□ -1
SSH3-204ENST00000525913 HOXC6P09630 235 aa8.78□□□□□ -1
SSH3-204ENST00000525913 DNAJB2P25686 324 aa8.78□□□□□ -1
SSH3-204ENST00000525913 ZEB1P37275 1124 aaPredicted RBP8.78□□□□□ -1
SSH3-204ENST00000525913 MRPS5P82675 430 aaKnown RBP8.78□□□□□ -1
SSH3-204ENST00000525913 PICALMQ13492 652 aa8.78□□□□□ -1
SSH3-204ENST00000525913 ADGRE1Q14246 886 aa8.78□□□□□ -1
SSH3-204ENST00000525913 ATG9AQ7Z3C6 839 aa8.78□□□□□ -1
SSH3-204ENST00000525913 ZNF384Q8TF68 577 aa8.78□□□□□ -1
SSH3-204ENST00000525913 PPM1EQ8WY54 764 aa8.78□□□□□ -1
SSH3-204ENST00000525913 RNPC3Q96LT9 517 aaKnown RBP8.78□□□□□ -1
SSH3-204ENST00000525913 NECAB3Q96P71 396 aaPredicted RBP8.78□□□□□ -1
SSH3-204ENST00000525913 C1QTNF1Q9BXJ1 281 aa8.78□□□□□ -1
SSH3-204ENST00000525913 SRCIN1Q9C0H9 1055 aa8.78□□□□□ -1
SSH3-204ENST00000525913 EPHX3Q9H6B9 360 aa8.78□□□□□ -1
SSH3-204ENST00000525913 PRDM5Q9NQX1 630 aaPredicted RBP8.78□□□□□ -1
SSH3-204ENST00000525913 THEGQ9P2T0 379 aa8.78□□□□□ -1
SSH3-204ENST00000525913 GBF1Q92538 1859 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 EYA2O00167 538 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 CYBAP13498 195 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 SLC5A1P13866 664 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 PTPREP23469 700 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 CYP2C19P33261 490 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 BTDP43251 543 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 PHKA1P46020 1223 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 IRX3P78415 501 aaPredicted RBP8.77□□□□□ -1.01
SSH3-204ENST00000525913 TLE2Q04725 743 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 MTMR2Q13614 643 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 MFSD14CQ5VZR4 134 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 ARRDC4Q8NCT1 418 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 EMILIN3Q9NT22 766 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 DENND2AQ9ULE3 1009 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 NDUFB9Q9Y6M9 179 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 IL16Q14005 1332 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
SSH3-204ENST00000525913 C19orf81C9J6K1 198 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 KIAA0355O15063 1070 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 CNGA1P29973 690 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 PBX2P40425 430 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
SSH3-204ENST00000525913 SHROOM1Q2M3G4 852 aaPredicted RBP8.76□□□□□ -1.01
SSH3-204ENST00000525913 ANO1Q5XXA6 986 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 TIFAQ96CG3 184 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 PAGR1Q9BTK6 254 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 AS3MTQ9HBK9 375 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 TACC3Q9Y6A5 838 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 FANCIQ9NVI1 1328 aa8.76□□□□□ -1.01
SSH3-204ENST00000525913 SLC15A5A6NIM6 579 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 GRXCR1A8MXD5 290 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 SEMA3EO15041 775 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 ATP2B2Q01814 1243 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 GRB14Q14449 540 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 CCDC85BQ15834 202 aaPredicted RBP8.75□□□□□ -1.01
SSH3-204ENST00000525913 RASIP1Q5U651 963 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 C16orf59Q7L2K0 433 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 METTL16Q86W50 562 aaKnown RBP8.75□□□□□ -1.01
SSH3-204ENST00000525913 FERMT2Q96AC1 680 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 GAS2L1Q99501 681 aaPredicted RBP8.75□□□□□ -1.01
SSH3-204ENST00000525913 PBX4Q9BYU1 374 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 PRDM12Q9H4Q4 367 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 C11orf16Q9NQ32 467 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 TMOD4Q9NZQ9 345 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 RABGAP1Q9Y3P9 1069 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 MROH7-TTC4A0A0A0MT08 1334 aa8.75□□□□□ -1.01
SSH3-204ENST00000525913 CLTBP09497 229 aa8.74□□□□□ -1.01
SSH3-204ENST00000525913 ADORA1P30542 326 aa8.74□□□□□ -1.01
SSH3-204ENST00000525913 MECOMQ03112 1051 aa8.74□□□□□ -1.01
SSH3-204ENST00000525913 LRRC41Q15345 812 aa8.74□□□□□ -1.01
SSH3-204ENST00000525913 CCDC102BQ68D86 513 aa8.74□□□□□ -1.01
SSH3-204ENST00000525913 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
SSH3-204ENST00000525913 CCAR1Q8IX12 1150 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms