RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SERTAD1Q9UHV2 236 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 ISY1Q9ULR0 285 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
CD44-213ENST00000525209 CHMP3Q9Y3E7 222 aa5.41□□□□□ -1.54
CD44-213ENST00000525209 MAGEB6P1A0A0J9YX57 407 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 ABHD14A-ACY1A0A1B0GW23 586 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 A6NCN8 305 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 PLD2O14939 933 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 ADCY3O60266 1144 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 STAU1O95793 577 aaKnown RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 AGR2O95994 175 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 NR3C2P08235 984 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 SLC5A1P13866 664 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 TIMP2P16035 220 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 SCTRP47872 440 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 RXRGP48443 463 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 LMNB2Q03252 620 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 STRN3Q13033 797 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 CAMK2GQ13555 558 aaPredicted RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 DGKZQ13574 1117 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 STAT4Q14765 748 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 SEZ6Q53EL9 994 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 SPECC1Q5M775 1068 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 SNAP47Q5SQN1 464 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 CNNM4Q6P4Q7 775 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 EEPD1Q7L9B9 569 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 FRS2Q8WU20 508 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 TTC17Q96AE7 1141 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 PAWRQ96IZ0 340 aaKnown RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 ZFP42Q96MM3 310 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 FERD3LQ96RJ6 166 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 ZFAND3Q9H8U3 227 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 NCOA5Q9HCD5 579 aaKnown RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 NPHS2Q9NP85 383 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 OSGEPQ9NPF4 335 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 DDX21Q9NR30 783 aaKnown RBP eCLIP5.4□□□□□ -1.54
CD44-213ENST00000525209 INTS7Q9NVH2 962 aaKnown RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 IP6K2Q9UHH9 426 aa5.4□□□□□ -1.54
CD44-213ENST00000525209 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
CD44-213ENST00000525209 IGF1RP08069 1367 aa5.4□□□□□ -1.55
CD44-213ENST00000525209 ROBO2Q9HCK4 1378 aa5.4□□□□□ -1.55
CD44-213ENST00000525209 SOBPA7XYQ1 873 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 B2RBV5 119 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 TERTO14746 1132 aaKnown RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 BRINP1O60477 761 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 ADH1CP00326 375 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SETSIPP0DME0 302 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 ARAFP10398 606 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 ATICP31939 592 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 CCNFP41002 786 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 VEGFBP49765 207 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 ZBED6P86452 979 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 GRM2Q14416 872 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 GRM3Q14832 879 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 MAP3K11Q16584 847 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 GPR158Q5T848 1215 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 FBXW10Q5XX13 1052 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 CYB5RLQ6IPT4 315 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 FAM196AQ6ZSG2 479 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 RSRC2Q7L4I2 434 aaKnown RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 SPATS2Q86XZ4 545 aaKnown RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 FAM178BQ8IXR5 827 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 OR8H2Q8N162 312 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 NKAIN3Q8N8D7 197 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SNX29Q8TEQ0 813 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 LEO1Q8WVC0 666 aaPredicted RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 DDX1Q92499 740 aaKnown RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 KIFC2Q96AC6 838 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SLC10A4Q96EP9 437 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 TNIP3Q96KP6 325 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 CLUHP3Q96NS8 147 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 MYCBPQ99417 103 aaPredicted RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 LRRC3Q9BY71 257 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SEZ6LQ9BYH1 1024 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 SUV39H2Q9H5I1 410 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 KMT5AQ9NQR1 393 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 MAN1C1Q9NR34 630 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 RCAN3Q9UKA8 241 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
CD44-213ENST00000525209 DMTF1Q9Y222 760 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 FAM50BQ9Y247 325 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 TLR6Q9Y2C9 796 aa5.39□□□□□ -1.55
CD44-213ENST00000525209 A0A087WZG4 1122 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 FAM83GA6ND36 823 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 J3KRW8 73 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 PMM2O15305 246 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 GADD45BO75293 160 aaPredicted RBP5.38□□□□□ -1.55
CD44-213ENST00000525209 FBXO21O94952 628 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 NCAM1P13591 858 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 LMNB1P20700 586 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 GRM5P41594 1212 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 TSPAN7P41732 249 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 ECE1P42892 770 aa5.38□□□□□ -1.55
CD44-213ENST00000525209 LIG3P49916 1009 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms