RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 TTLL7Q6ZT98 887 aa11.67□□□□□ -0.54
SPIDR-225ENST00000524141 DIS3L2Q8IYB7 885 aaKnown RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 NAPGQ99747 312 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-225ENST00000524141 CYP27B1O15528 508 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 APPP05067 770 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 PBX1P40424 430 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 ORAI2Q96SN7 254 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 PNKPQ96T60 521 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 ADD3Q9UEY8 706 aaKnown RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 RSPH14Q9UHP6 348 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 CHD4Q14839 1912 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 BTBD18B2RXH4 712 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 APTXQ7Z2E3 356 aaKnown RBP11.66□□□□□ -0.54
SPIDR-225ENST00000524141 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 MED15Q96RN5 788 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 CNNM2Q9H8M5 875 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
SPIDR-225ENST00000524141 TEX33O43247 280 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 MCM3P25205 808 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 ZC3H6P61129 1189 aaKnown RBP11.65□□□□□ -0.54
SPIDR-225ENST00000524141 CASP8Q14790 479 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 CDKAL1Q5VV42 579 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 KRT28Q7Z3Y7 464 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 RBM33Q96EV2 1170 aaKnown RBP11.65□□□□□ -0.54
SPIDR-225ENST00000524141 LRP6O75581 1613 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 TRIM14Q14142 442 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 ALX1Q15699 326 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 LCMT1Q9UIC8 334 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 FAN1Q9Y2M0 1017 aa11.65□□□□□ -0.54
SPIDR-225ENST00000524141 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 MCAMP43121 646 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CCDC102AQ96A19 550 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 GSDMAQ96QA5 445 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 VIPAS39Q9H9C1 493 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 DENND2AQ9ULE3 1009 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 MYH8P13535 1937 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 ALS2Q96Q42 1657 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
SPIDR-225ENST00000524141 TRIM66O15016 1216 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 DEXIO95424 95 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 GRIN1Q05586 938 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CUL4BQ13620 913 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
SPIDR-225ENST00000524141 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 GRAMD1CQ8IYS0 662 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CTCFLQ8NI51 663 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CPLX3Q8WVH0 158 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
SPIDR-225ENST00000524141 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPIDR-225ENST00000524141 CASP14P31944 242 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 RCAN1P53805 252 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 VSNL1P62760 191 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 MAP9Q49MG5 647 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 PLA2G12BQ9BX93 195 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 KRT23Q9C075 422 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 BMP15O95972 392 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 GYPCP04921 128 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 RHOXF2BP0C7M4 288 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 MAGEA9P43362 315 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 RTN1Q16799 776 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 CCDC148Q8NFR7 591 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 RHOXF2Q9BQY4 288 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 MYL10Q9BUA6 226 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 ISCA1Q9BUE6 129 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 RIC1Q4ADV7 1423 aa11.63□□□□□ -0.55
SPIDR-225ENST00000524141 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 SPAG1Q07617 926 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 ANKRD20A12PQ8NF67 263 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 N4BP1O75113 896 aaKnown RBP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 PDE4CQ08493 712 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
SPIDR-225ENST00000524141 TMTC2Q8N394 836 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 ABHD10Q9NUJ1 306 aa11.62□□□□□ -0.55
SPIDR-225ENST00000524141 ZSWIM5Q9P217 1185 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms