RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 FOXP4Q8IVH2 680 aaPredicted RBP14.23□□□□□ -0.13
CCNC-218ENST00000524049 CCAR1Q8IX12 1150 aaKnown RBP14.23□□□□□ -0.13
CCNC-218ENST00000524049 TEX11Q8IYF3 940 aa14.23□□□□□ -0.13
CCNC-218ENST00000524049 SPATA5Q8NB90 893 aa14.23□□□□□ -0.13
CCNC-218ENST00000524049 ZNF384Q8TF68 577 aa14.23□□□□□ -0.13
CCNC-218ENST00000524049 NEUROD6Q96NK8 337 aa14.23□□□□□ -0.13
CCNC-218ENST00000524049 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
CCNC-218ENST00000524049 RAI14Q9P0K7 980 aa14.23□□□□□ -0.13
CCNC-218ENST00000524049 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
CCNC-218ENST00000524049 UQCRFS1P1P0C7P4 283 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 COL6A1P12109 1028 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
CCNC-218ENST00000524049 RGS2P41220 211 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 HERVK_113P62684 666 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 MTX1Q13505 466 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 MTMR2Q13614 643 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 FAM109BQ6ICB4 259 aaPredicted RBP14.22□□□□□ -0.13
CCNC-218ENST00000524049 NOB1Q9ULX3 412 aaKnown RBP14.22□□□□□ -0.13
CCNC-218ENST00000524049 SZT2Q5T011 3432 aa14.22□□□□□ -0.13
CCNC-218ENST00000524049 PFASO15067 1338 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 USP17L10C9JJH3 530 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 SRGAP3O43295 1099 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 ARID4AP29374 1257 aaPredicted RBP14.21□□□□□ -0.13
CCNC-218ENST00000524049 CACNB2Q08289 660 aaPredicted RBP14.21□□□□□ -0.13
CCNC-218ENST00000524049 RRP1BQ14684 758 aaKnown RBP14.21□□□□□ -0.13
CCNC-218ENST00000524049 Q7L0L9 218 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 USP6NLQ92738 828 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 LRP2BPQ9P2M1 347 aa14.21□□□□□ -0.13
CCNC-218ENST00000524049 MYH2Q9UKX2 1941 aa14.21□□□□□ -0.14
CCNC-218ENST00000524049 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
CCNC-218ENST00000524049 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 ERVK-24P63145 666 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 LHX8Q68G74 356 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
CCNC-218ENST00000524049 MEIS3Q99687 375 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 TXNRD2Q9NNW7 524 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
CCNC-218ENST00000524049 PTPRFP10586 1907 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 CLCN6P51797 869 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 PPP4CP60510 307 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 CCNA1P78396 465 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 MORN1Q5T089 497 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 ATF7IPQ6VMQ6 1270 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 TBC1D9Q6ZT07 1266 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 GPR142Q7Z601 462 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 CRACR2BQ8N4Y2 399 aaPredicted RBP14.19□□□□□ -0.14
CCNC-218ENST00000524049 SH3RF3Q8TEJ3 882 aaPredicted RBP14.19□□□□□ -0.14
CCNC-218ENST00000524049 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 APBA2Q99767 749 aa14.19□□□□□ -0.14
CCNC-218ENST00000524049 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
CCNC-218ENST00000524049 MSCO60682 206 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 G3BP1Q13283 466 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCNC-218ENST00000524049 Q3C1V9 767 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 NAA16Q6N069 864 aaPredicted RBP14.18□□□□□ -0.14
CCNC-218ENST00000524049 USP17L2Q6R6M4 530 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
CCNC-218ENST00000524049 EDC3Q96F86 508 aaKnown RBP14.18□□□□□ -0.14
CCNC-218ENST00000524049 LBHD1Q9BQE6 289 aaPredicted RBP14.18□□□□□ -0.14
CCNC-218ENST00000524049 RABGAP1Q9Y3P9 1069 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
CCNC-218ENST00000524049 LOC285556D6RIA3 1793 aa14.18□□□□□ -0.14
CCNC-218ENST00000524049 POTEB2H3BUK9 544 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 CCND3P30281 292 aaPredicted RBP14.17□□□□□ -0.14
CCNC-218ENST00000524049 MCAMP43121 646 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 LRRC26Q2I0M4 334 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 PI16Q6UXB8 463 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 TGFBRAP1Q8WUH2 860 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 AATFQ9NY61 560 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCNC-218ENST00000524049 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
CCNC-218ENST00000524049 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
CCNC-218ENST00000524049 MDM2Q00987 491 aaPredicted RBP14.16□□□□□ -0.14
CCNC-218ENST00000524049 CERS3Q8IU89 383 aa14.16□□□□□ -0.14
CCNC-218ENST00000524049 MAPKAPK5Q8IW41 473 aa14.16□□□□□ -0.14
CCNC-218ENST00000524049 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCNC-218ENST00000524049 PAGR1Q9BTK6 254 aa14.16□□□□□ -0.14
CCNC-218ENST00000524049 PORCNQ9H237 461 aa14.16□□□□□ -0.14
CCNC-218ENST00000524049 ZBTB21Q9ULJ3 1066 aa14.16□□□□□ -0.14
CCNC-218ENST00000524049 FLT1P17948 1338 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 ALPK3Q96L96 1907 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
CCNC-218ENST00000524049 SLC15A5A6NIM6 579 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L15C9J2P7 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L13C9JLJ4 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L11C9JVI0 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L18D6R9N7 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L22D6RA61 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L17D6RBQ6 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L19D6RCP7 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L20D6RJB6 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP14P54578 494 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 USP17L24Q0WX57 530 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 CCL14Q16627 93 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
CCNC-218ENST00000524049 LPAR1Q92633 364 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms