RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
PTPN12-216ENST00000523952 FOSL2P15408 326 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 PHKA1P46020 1223 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
PTPN12-216ENST00000523952 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 ERICH6Q7L0X2 663 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
PTPN12-216ENST00000523952 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 SMCHD1A6NHR9 2005 aa11.55□□□□□ -0.56
PTPN12-216ENST00000523952 LDHCP07864 332 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 CAP2P40123 477 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 HERVK_113P62684 666 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 GSTO1P78417 241 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 MTMR2Q13614 643 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 MFSD14CQ5VZR4 134 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 PLEKHH3Q7Z736 793 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 MYLIPQ8WY64 445 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 APBA2Q99767 749 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
PTPN12-216ENST00000523952 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
PTPN12-216ENST00000523952 GBF1Q92538 1859 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 MSCO60682 206 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 COL9A1P20849 921 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 CLCN6P51797 869 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 ERVK-24P63145 666 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 CCL14Q16627 93 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 SH3D19Q5HYK7 790 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 CCDC102BQ68D86 513 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 GPR142Q7Z601 462 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 GTF3C2Q8WUA4 911 aaPredicted RBP11.53□□□□□ -0.56
PTPN12-216ENST00000523952 P2RX7Q99572 595 aaKnown RBP11.53□□□□□ -0.56
PTPN12-216ENST00000523952 SEMA6BQ9H3T3 888 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
PTPN12-216ENST00000523952 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 VCANP13611 3396 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 PTPRCP08575 1304 aa11.53□□□□□ -0.56
PTPN12-216ENST00000523952 C19orf81C9J6K1 198 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 CIAO1O76071 339 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 ASNSP08243 561 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 BACE1P56817 501 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 RTP1P59025 263 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 CCNA1P78396 465 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-216ENST00000523952 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
PTPN12-216ENST00000523952 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
PTPN12-216ENST00000523952 TCF20Q9UGU0 1960 aaKnown RBP11.52□□□□□ -0.57
PTPN12-216ENST00000523952 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 PEX10O60683 326 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 MAP4K4O95819 1239 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 RFX5P48382 616 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 ATP2B2Q01814 1243 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 MECOMQ03112 1051 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 RASGRF1Q13972 1273 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 SHHQ15465 462 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 GORABQ5T7V8 394 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 MRS2Q9HD23 443 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 TXNRD2Q9NNW7 524 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 RAI14Q9P0K7 980 aa11.51□□□□□ -0.57
PTPN12-216ENST00000523952 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
PTPN12-216ENST00000523952 TNFRSF10AO00220 468 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 DNM1LO00429 736 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 UBTFL1P0CB47 393 aaPredicted RBP11.5□□□□□ -0.57
PTPN12-216ENST00000523952 ADORA1P30542 326 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 SMAD3P84022 425 aaKnown RBP11.5□□□□□ -0.57
PTPN12-216ENST00000523952 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 CCDC184Q52MB2 194 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 MORN1Q5T089 497 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 ARRDC4Q8NCT1 418 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 LPAR1Q92633 364 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 PORCNQ9H237 461 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 PI4KBQ9UBF8 816 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 HDAC5Q9UQL6 1122 aa11.5□□□□□ -0.57
PTPN12-216ENST00000523952 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
PTPN12-216ENST00000523952 ZNF236Q9UL36 1845 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 RHBDL3P58872 404 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
PTPN12-216ENST00000523952 Q3C1V9 767 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 FEZ1Q99689 392 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
PTPN12-216ENST00000523952 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
PTPN12-216ENST00000523952 TIMM10P62072 90 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 C9orf50Q5SZB4 431 aa11.48□□□□□ -0.57
PTPN12-216ENST00000523952 GJC2Q5T442 439 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms