RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 CACNB2Q08289 660 aaPredicted RBP9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 TBC1D9Q6ZT07 1266 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 SPATA5Q8NB90 893 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 LBHD1Q9BQE6 289 aaPredicted RBP9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 NOB1Q9ULX3 412 aaKnown RBP9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 PTPRFP10586 1907 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 ALPK3Q96L96 1907 aa9.79□□□□□ -0.84
NSMCE2-213ENST00000523824 DOCK3Q8IZD9 2030 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 USP17L10C9JJH3 530 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 SRGAP3O43295 1099 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 CCND3P30281 292 aaPredicted RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 RGS2P41220 211 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 LRRC26Q2I0M4 334 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 LHX8Q68G74 356 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 PLEKHH3Q7Z736 793 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 CRACR2BQ8N4Y2 399 aaPredicted RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 SH3RF3Q8TEJ3 882 aaPredicted RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 PAGR1Q9BTK6 254 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 DHX36Q9H2U1 1008 aaKnown RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 TXNRD2Q9NNW7 524 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 LRP2BPQ9P2M1 347 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 RBPJLQ9UBG7 517 aa9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
NSMCE2-213ENST00000523824 DDX60LQ5H9U9 1706 aaKnown RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 BAG3O95817 575 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 ERVK-24P63145 666 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 CCL14Q16627 93 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 Q3C1V9 767 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 FAM109BQ6ICB4 259 aaPredicted RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 PI16Q6UXB8 463 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 FOXP4Q8IVH2 680 aaPredicted RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 GTF3C2Q8WUA4 911 aaPredicted RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 TGFBRAP1Q8WUH2 860 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 USP6NLQ92738 828 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 EDC3Q96F86 508 aaKnown RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 MEIS3Q99687 375 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 SENP6Q9GZR1 1112 aaPredicted RBP9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 PORCNQ9H237 461 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
NSMCE2-213ENST00000523824 LOC285556D6RIA3 1793 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 POTEB2H3BUK9 544 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 GDF11O95390 407 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 GNAI3P08754 354 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 PLCG2P16885 1265 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 JAG1P78504 1218 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 MORN1Q5T089 497 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 MFSD14CQ5VZR4 134 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 NAA16Q6N069 864 aaPredicted RBP9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 MAPKAPK5Q8IW41 473 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 APBA2Q99767 749 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 AATFQ9NY61 560 aaKnown RBP eCLIP9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 PRKAG2Q9UGJ0 569 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 UNC80Q8N2C7 3258 aa9.76□□□□□ -0.85
NSMCE2-213ENST00000523824 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 CNGA1P29973 690 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 MCAMP43121 646 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 ATN1P54259 1190 aaPredicted RBP9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 CCNA1P78396 465 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 G3BP1Q13283 466 aaKnown RBP eCLIP9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 WDR78Q5VTH9 848 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 GUCD1Q96NT3 240 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 PALD1Q9ULE6 856 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 ZBTB21Q9ULJ3 1066 aa9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.75□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L15C9J2P7 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L13C9JLJ4 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L11C9JVI0 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L18D6R9N7 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L22D6RA61 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L17D6RBQ6 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L19D6RCP7 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L20D6RJB6 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 HLA-DOAP06340 250 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 PPP4CP60510 307 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 USP17L24Q0WX57 530 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 TTC39AQ5SRH9 613 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 ZNF697Q5TEC3 545 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 ATF7IPQ6VMQ6 1270 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 METTL16Q86W50 562 aaKnown RBP9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 DNAJC18Q9H819 358 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 DDX20Q9UHI6 824 aaKnown RBP9.74□□□□□ -0.85
NSMCE2-213ENST00000523824 SAP30BPQ9UHR5 308 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms