RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 RAPGEFL1Q9UHV5 662 aa10.59□□□□□ -0.71
CCNC-215ENST00000523799 TMEM265A0A087WTH1 108 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 SMAPO00193 183 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 PLIN1O60240 522 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 GYG1P46976 350 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 GNAI1P63096 354 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
CCNC-215ENST00000523799 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 GADL1Q6ZQY3 521 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
CCNC-215ENST00000523799 IFT57Q9NWB7 429 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 PNMA3Q9UL41 463 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 SUGT1Q9Y2Z0 365 aa10.58□□□□□ -0.72
CCNC-215ENST00000523799 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 RGS20O76081 388 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 FECHP22830 423 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 CALD1Q05682 793 aaKnown RBP10.57□□□□□ -0.72
CCNC-215ENST00000523799 LRRC26Q2I0M4 334 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 TAF7LQ5H9L4 462 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 HHIPL2Q6UWX4 724 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 ANKRD13CQ8N6S4 541 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 STK31Q9BXU1 1019 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 CNNM1Q9NRU3 951 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 ZHX2Q9Y6X8 837 aa10.57□□□□□ -0.72
CCNC-215ENST00000523799 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 LTBP2Q14767 1821 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
CCNC-215ENST00000523799 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
CCNC-215ENST00000523799 SMAD3P84022 425 aaKnown RBP10.56□□□□□ -0.72
CCNC-215ENST00000523799 MAP3K12Q12852 859 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 GRIK5Q16478 980 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 MAP3K21Q5TCX8 1036 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 NUDT18Q6ZVK8 323 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 SCYL3Q8IZE3 742 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 C8orf58Q8NAV2 365 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
CCNC-215ENST00000523799 PRKAG2Q9UGJ0 569 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 GJD2Q9UKL4 321 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 AGTPBP1Q9UPW5 1226 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
CCNC-215ENST00000523799 DOCK1Q14185 1865 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 PTPRAP18433 802 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 FOXO4P98177 505 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 TRIM32Q13049 653 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 CHAF1AQ13111 956 aaPredicted RBP10.55□□□□□ -0.72
CCNC-215ENST00000523799 TRMT44Q8IYL2 757 aaKnown RBP10.55□□□□□ -0.72
CCNC-215ENST00000523799 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 WNT2BQ93097 391 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
CCNC-215ENST00000523799 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
CCNC-215ENST00000523799 ADGRG1Q9Y653 693 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 FRMPD3Q5JV73 1810 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 PIEZO1Q92508 2521 aa10.55□□□□□ -0.72
CCNC-215ENST00000523799 PHF20L1A8MW92 1017 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 XRCC5P13010 732 aaKnown RBP10.54□□□□□ -0.72
CCNC-215ENST00000523799 TCP10Q12799 353 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 CAVIN4Q5BKX8 364 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 FBXO33Q7Z6M2 555 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 TRIB2Q92519 343 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 SYNGAP1Q96PV0 1343 aa10.54□□□□□ -0.72
CCNC-215ENST00000523799 PABPC4Q13310 644 aaKnown RBP eCLIP10.53□□□□□ -0.727e-7■■■■■ 67.8
CCNC-215ENST00000523799 SHHQ15465 462 aa10.53□□□□□ -0.72
CCNC-215ENST00000523799 LMBR1LQ6UX01 489 aa10.53□□□□□ -0.72
CCNC-215ENST00000523799 PROCA1Q8NCQ7 364 aaPredicted RBP10.53□□□□□ -0.72
CCNC-215ENST00000523799 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
CCNC-215ENST00000523799 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
CCNC-215ENST00000523799 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.72
CCNC-215ENST00000523799 TRIM75PA6NK02 468 aa10.52□□□□□ -0.73
CCNC-215ENST00000523799 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
CCNC-215ENST00000523799 DNAAF4Q8WXU2 420 aa10.52□□□□□ -0.73
CCNC-215ENST00000523799 IQSEC3Q9UPP2 1182 aaPredicted RBP10.52□□□□□ -0.73
CCNC-215ENST00000523799 LRRFIP2Q9Y608 721 aaKnown RBP10.52□□□□□ -0.73
CCNC-215ENST00000523799 MROH5Q6ZUA9 1318 aa10.52□□□□□ -0.73
CCNC-215ENST00000523799 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 CTNND1O60716 968 aaKnown RBP10.51□□□□□ -0.73
CCNC-215ENST00000523799 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
CCNC-215ENST00000523799 CYP2B6P20813 491 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
CCNC-215ENST00000523799 NFIAQ12857 509 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCNC-215ENST00000523799 CDC42EP5Q6NZY7 148 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 ANKK1Q8NFD2 765 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 C1QTNF1Q9BXJ1 281 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 SENP6Q9GZR1 1112 aaPredicted RBP10.51□□□□□ -0.73
CCNC-215ENST00000523799 ATRNL1Q5VV63 1379 aa10.51□□□□□ -0.73
CCNC-215ENST00000523799 MAP3K10Q02779 954 aa10.5□□□□□ -0.73
CCNC-215ENST00000523799 FLIIQ13045 1269 aa10.5□□□□□ -0.73
CCNC-215ENST00000523799 FKBP5Q13451 457 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms