RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 PDIA3P30101 505 aaKnown RBP17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 SGMS1Q86VZ5 419 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 GTF3C6Q969F1 213 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 BRPF3Q9ULD4 1205 aa17.68■□□□□ 0.42
HMBOX1-210ENST00000523613 TNNI2P48788 182 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 FOXP4Q8IVH2 680 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 DDNO94850 711 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 EGFRP00533 1210 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 LMOD1P29536 600 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 TNFAIP1Q13829 316 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 SEC23AQ15436 765 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 ENAHQ8N8S7 591 aaPredicted RBP17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
HMBOX1-210ENST00000523613 ST3GAL1Q11201 340 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 SCRN1Q12765 414 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 APOA5Q6Q788 366 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 SENP2Q9HC62 589 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
HMBOX1-210ENST00000523613 GOLGB1Q14789 3259 aaKnown RBP17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 ZBTB43O43298 467 aa17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 DDIT3P35638 169 aa17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
HMBOX1-210ENST00000523613 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 NMT2O60551 498 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 SHMT1P34896 483 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 EPS15P42566 896 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 NEDD1Q8NHV4 660 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 METAP2P50579 478 aaKnown RBP eCLIP17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 DGKHQ86XP1 1220 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 CCDC17Q96LX7 622 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 LLPHQ9BRT6 129 aaKnown RBP17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
HMBOX1-210ENST00000523613 SIPA1L1O43166 1804 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 CATIPQ7Z7H3 387 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 METTL16Q86W50 562 aaKnown RBP17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 RAB11FIP4Q86YS3 637 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 ZNF654Q8IZM8 581 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 TRPM4Q8TD43 1214 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 DNAJC18Q9H819 358 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 NCOA5Q9HCD5 579 aaKnown RBP17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 HERC5Q9UII4 1024 aaKnown RBP17.63■□□□□ 0.41
HMBOX1-210ENST00000523613 PLIN4Q96Q06 1357 aa17.62■□□□□ 0.41
HMBOX1-210ENST00000523613 RCAN1P53805 252 aa17.62■□□□□ 0.41
HMBOX1-210ENST00000523613 RASA3Q14644 834 aa17.62■□□□□ 0.41
HMBOX1-210ENST00000523613 MYL10Q9BUA6 226 aa17.62■□□□□ 0.41
HMBOX1-210ENST00000523613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.62■□□□□ 0.411e-20■■■■■ 55.6
HMBOX1-210ENST00000523613 MYH8P13535 1937 aa17.62■□□□□ 0.41
HMBOX1-210ENST00000523613 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CPLX1O14810 134 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CALM1P0DP23 149 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CALM2P0DP24 149 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CALM3P0DP25 149 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 AKR1B1P15121 316 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 GJB2P29033 226 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CERKLQ49MI3 558 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 APOBEC3FQ8IUX4 373 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 KAT14Q9H8E8 782 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 ADARB2Q9NS39 739 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 ASTN2O75129 1339 aaPredicted RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 MPHOSPH10O00566 681 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 DDAH1O94760 285 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 RXRAP19793 462 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 RCSD1Q6JBY9 416 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 CPLX2Q6PUV4 134 aaKnown RBP17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
HMBOX1-210ENST00000523613 NID2Q14112 1375 aa17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 NUCB2P80303 420 aa17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 PPP4R3BQ5MIZ7 849 aa17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 ANGEL2Q5VTE6 544 aaKnown RBP17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 CCDC144CPQ8IYA2 1237 aa17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 STX8Q9UNK0 236 aa17.6■□□□□ 0.41
HMBOX1-210ENST00000523613 CCDC196A0A1B0GTZ2 297 aa17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 GLTPD2A6NH11 291 aa17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 CDKL5O76039 1030 aa17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 SLURP2P0DP57 97 aa17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 PPP2R5BQ15173 497 aa17.59■□□□□ 0.41
HMBOX1-210ENST00000523613 RTN1Q16799 776 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms