RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 CUL9Q8IWT3 2517 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 MCAMP43121 646 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 GDF15Q99988 308 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 OGDHLQ9ULD0 1010 aa11.53□□□□□ -0.56
EBF1-210ENST00000523464 A0A0C4DFX4 3053 aa11.52□□□□□ -0.56
EBF1-210ENST00000523464 ATAD5Q96QE3 1844 aa11.52□□□□□ -0.57
EBF1-210ENST00000523464 GLRX3O76003 335 aaKnown RBP11.52□□□□□ -0.57
EBF1-210ENST00000523464 HLA-DOAP06340 250 aa11.52□□□□□ -0.57
EBF1-210ENST00000523464 HERVK_113P62684 666 aa11.52□□□□□ -0.57
EBF1-210ENST00000523464 PDE3AQ14432 1141 aa11.52□□□□□ -0.57
EBF1-210ENST00000523464 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.57
EBF1-210ENST00000523464 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
EBF1-210ENST00000523464 USP14P54578 494 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 CCNA1P78396 465 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 LRIT3Q3SXY7 679 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 TTC39AQ5SRH9 613 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 USP17L2Q6R6M4 530 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 CCAR1Q8IX12 1150 aaKnown RBP11.51□□□□□ -0.57
EBF1-210ENST00000523464 SSH3Q8TE77 659 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 SH3RF3Q8TEJ3 882 aaPredicted RBP11.51□□□□□ -0.57
EBF1-210ENST00000523464 P2RX7Q99572 595 aaKnown RBP11.51□□□□□ -0.57
EBF1-210ENST00000523464 C11orf49Q9H6J7 331 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 STAP2Q9UGK3 403 aa11.51□□□□□ -0.57
EBF1-210ENST00000523464 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 TRIM27P14373 513 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 RGS2P41220 211 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 ERVK-9P63128 1117 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 ERVK-24P63145 666 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 MTMR2Q13614 643 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
EBF1-210ENST00000523464 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 USP6NLQ92738 828 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 C12orf42Q96LP6 360 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 EHD4Q9H223 541 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
EBF1-210ENST00000523464 RBPJLQ9UBG7 517 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
EBF1-210ENST00000523464 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 FPGT-TNNI3KV9GXZ4 949 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 FLT1P17948 1338 aa11.5□□□□□ -0.57
EBF1-210ENST00000523464 PNMA6EA0A0J9YXQ4 647 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L15C9J2P7 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L13C9JLJ4 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L11C9JVI0 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L18D6R9N7 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L22D6RA61 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L17D6RBQ6 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L19D6RCP7 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L20D6RJB6 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 MSCO60682 206 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 SLURP2P0DP57 97 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
EBF1-210ENST00000523464 MNX1P50219 401 aaPredicted RBP11.49□□□□□ -0.57
EBF1-210ENST00000523464 USP17L24Q0WX57 530 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
EBF1-210ENST00000523464 TATDN1Q6P1N9 297 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 LBX2Q6XYB7 198 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 TTC6Q86TZ1 520 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 TRIB2Q92519 343 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
EBF1-210ENST00000523464 ZBTB21Q9ULJ3 1066 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 FOCADQ5VW36 1801 aa11.49□□□□□ -0.57
EBF1-210ENST00000523464 CYP2E1P05181 493 aaPredicted RBP11.48□□□□□ -0.57
EBF1-210ENST00000523464 COL6A1P12109 1028 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
EBF1-210ENST00000523464 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
EBF1-210ENST00000523464 MORN1Q5T089 497 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 APBA2Q99767 749 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 PALD1Q9ULE6 856 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
EBF1-210ENST00000523464 MAST2Q6P0Q8 1798 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
EBF1-210ENST00000523464 ALPK3Q96L96 1907 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 PLXNB2O15031 1838 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 SLC15A5A6NIM6 579 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
EBF1-210ENST00000523464 HOXC6P09630 235 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 CYP2B6P20813 491 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 CACNB2Q08289 660 aaPredicted RBP11.47□□□□□ -0.57
EBF1-210ENST00000523464 MAP3K12Q12852 859 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 GPR142Q7Z601 462 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 C7orf61Q8IZ16 206 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 MIER1Q8N108 512 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
EBF1-210ENST00000523464 DIS3LQ8TF46 1054 aaKnown RBP11.47□□□□□ -0.57
EBF1-210ENST00000523464 EDC3Q96F86 508 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms