RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 EXOC6BQ9Y2D4 811 aa15.41■□□□□ 0.06
TOP1MT-217ENST00000523417 DOCK1Q14185 1865 aa15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 AACSQ86V21 672 aa15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 CRACR2BQ8N4Y2 399 aaPredicted RBP15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 U2AF1L4Q8WU68 220 aaKnown RBP15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 RIOK1Q9BRS2 568 aaKnown RBP15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 PAK6Q9NQU5 681 aaPredicted RBP15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 TAOK2Q9UL54 1235 aa15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
TOP1MT-217ENST00000523417 MKI67P46013 3256 aaKnown RBP15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 RAB11FIP3O75154 756 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 MTMR2Q13614 643 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 SIRT2Q8IXJ6 389 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 MAGEB6Q8N7X4 407 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 GTF3C2Q8WUA4 911 aaPredicted RBP15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 KIF1BPQ96EK5 621 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 C12orf42Q96LP6 360 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 P2RX7Q99572 595 aaKnown RBP15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 CRISPLD2Q9H0B8 497 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 UNC93B1Q9H1C4 597 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 TMOD4Q9NZQ9 345 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 SERPINB13Q9UIV8 391 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 ZBTB21Q9ULJ3 1066 aa15.39■□□□□ 0.05
TOP1MT-217ENST00000523417 HMMRO75330 724 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 INHAP05111 366 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L2Q6R6M4 530 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 MIGA1Q8NAN2 632 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 RBPJLQ9UBG7 517 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 PTPRFP10586 1907 aa15.38■□□□□ 0.05
TOP1MT-217ENST00000523417 XRCC5P13010 732 aaKnown RBP15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 ELNP15502 786 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 USP5P45974 858 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 HERVK_113P62684 666 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 IRX3P78415 501 aaPredicted RBP15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 GPRC5AQ8NFJ5 357 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 HTATIP2Q9BUP3 242 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 SAP30BPQ9UHR5 308 aaKnown RBP15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
TOP1MT-217ENST00000523417 H0YGN5 161 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 GDF11O95390 407 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 GH2P01242 217 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 GABPAQ06546 454 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 SLC9C2Q5TAH2 1124 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 BRCA2P51587 3418 aa15.36■□□□□ 0.05
TOP1MT-217ENST00000523417 MAGEB6P1A0A0J9YX57 407 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 TCRBV5S4A2TA0A5A2 114 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 HMGCRP04035 888 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 PDE6AP16499 860 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 MAPK4P31152 587 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 USP14P54578 494 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 Q3C1V9 767 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 CERKLQ49MI3 558 aaPredicted RBP15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 POTEEQ6S8J3 1075 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 LBX2Q6XYB7 198 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 TRMT44Q8IYL2 757 aaKnown RBP15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 USP6NLQ92738 828 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 KIAA1683Q9H0B3 1180 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 TXNRD2Q9NNW7 524 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 COLQQ9Y215 455 aaPredicted RBP15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 COG6Q9Y2V7 657 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 RPTORQ8N122 1335 aa15.35■□□□□ 0.05
TOP1MT-217ENST00000523417 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L15C9J2P7 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L13C9JLJ4 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L11C9JVI0 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L18D6R9N7 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L22D6RA61 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L17D6RBQ6 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L19D6RCP7 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L20D6RJB6 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 IFIT2P09913 472 aaKnown RBP15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 ATP5JP18859 108 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 SHMT1P34896 483 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 PLCD1P51178 756 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 USP17L24Q0WX57 530 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 PDE3AQ14432 1141 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 ANKLE1Q8NAG6 615 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 DPF3Q92784 378 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 DEFB118Q96PH6 123 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 CABP5Q9NP86 173 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
TOP1MT-217ENST00000523417 SIPA1L1O43166 1804 aa15.33■□□□□ 0.05
TOP1MT-217ENST00000523417 MGAMO43451 1857 aa15.33■□□□□ 0.05
TOP1MT-217ENST00000523417 FARP2O94887 1054 aaPredicted RBP15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 ABCB5Q2M3G0 1257 aa15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 MAP3K21Q5TCX8 1036 aa15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 NUDT12Q9BQG2 462 aa15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 CRNKL1Q9BZJ0 848 aaKnown RBP15.33■□□□□ 0.04
TOP1MT-217ENST00000523417 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms