RNA–Protein interactions for RNA: ENST00000523028.5

SMG1P4-204, Transcript of SMG1 pseudogene 4, human

BASIC

Gene SMG1P4, Length 4,131 nt, Biotype transcribed unprocessed pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1P4-204	ENST00000523028	DYNC1I2	Q13409	638 aa	Known RBP	5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CASP8	Q14790	479 aa		5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	KIAA0753	Q2KHM9	967 aa		5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	XAGE3	Q8WTP9	111 aa		5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PAG1	Q9NWQ8	432 aa		5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TMOD2	Q9NZR1	351 aa		5.69	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RBM5	P52756	815 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CRYM	Q14894	314 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TCERG1L	Q5VWI1	586 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ARMC9	Q7Z3E5	817 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CROCCP2	Q86T23	111 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	GBP7	Q8N8V2	638 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TMC2	Q8TDI7	906 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CCDC42	Q96M95	316 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	FLT4	P35916	1363 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	LMTK3	Q96Q04	1460 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TLDC2	A0PJX2	215 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SGSM2	O43147	1006 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CD2BP2	O95400	341 aa	Known RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	HOXB7	P09629	217 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CALM1	P0DP23	149 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CALM2	P0DP24	149 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CALM3	P0DP25	149 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	STAT6	P42226	847 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	AFM	P43652	599 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	POLE2	P56282	527 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	MDM2	Q00987	491 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	MTHFSD	Q2M296	383 aa	Known RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NBPF20	Q3BBV1	942 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	VSIG1	Q86XK7	387 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	GDAP1L1	Q96MZ0	367 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	YIPF3	Q9GZM5	350 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	UBA5	Q9GZZ9	404 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PLEKHA4	Q9H4M7	779 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ST7	Q9NRC1	585 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NUP153	P49790	1475 aa	Known RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SHANK2	Q9UPX8	1470 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	STX10	O60499	249 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	GNAT2	P19087	354 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PRPH	P41219	470 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ATP1A2	P50993	1020 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	MUM1	Q2TAK8	710 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SLC9C2	Q5TAH2	1124 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	IGSF22	Q8N9C0	903 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	IQUB	Q8NA54	791 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CUL5	Q93034	780 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NAP1L3	Q99457	506 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TM6SF1	Q9BZW5	370 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NOP53	Q9NZM5	478 aa	Known RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SAR1B	Q9Y6B6	198 aa		5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	BLM	P54132	1417 aa	Predicted RBP	5.68	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SSTR3	P32745	418 aa	Predicted RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RASSF2	P50749	326 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ZBTB16	Q05516	673 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SLC30A9	Q6PML9	568 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TCP11	Q8WWU5	503 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SMC6	Q96SB8	1091 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CCDC77	Q9BR77	488 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ITSN2	Q9NZM3	1697 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NPAT	Q14207	1427 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	KIF24	Q5T7B8	1368 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028		A0A1W2PRG0	241 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	BICDL2	A1A5D9	508 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CHL1	O00533	1208 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RNF113A	O15541	343 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	GPT	P24298	496 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PPP1R2	P41236	205 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NLRP12	P59046	1061 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ST5	P78524	1137 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PRPF4B	Q13523	1007 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TRIM14	Q14142	442 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	IFIT1B	Q5T764	474 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	FAM173B	Q6P4H8	233 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CYP26C1	Q6V0L0	522 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PHLDB2	Q86SQ0	1253 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	SUGP1	Q8IWZ8	645 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	LMBR1	Q8WVP7	490 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	CHAMP1	Q96JM3	812 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TSGA10	Q9BZW7	698 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	EHMT1	Q9H9B1	1298 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	PPIP5K1	Q6PFW1	1433 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ZPR1	O75312	459 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	ADAMTS2	O95450	1211 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RPS6KB1	P23443	525 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	RILPL1	Q5EBL4	403 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TMEM92	Q6UXU6	159 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	BICDL1	Q6ZP65	573 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	UBLCP1	Q8WVY7	318 aa	Predicted RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	DTNBP1	Q96EV8	351 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	FAM210A	Q96ND0	272 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	BEGAIN	Q9BUH8	593 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	DNAI2	Q9GZS0	605 aa		5.67	□□□□□ -1.5
SMG1P4-204	ENST00000523028	HELLS	Q9NRZ9	838 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms