RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 PABPC4Q13310 644 aaKnown RBP eCLIP17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 MTMR2Q13614 643 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 PAK6Q9NQU5 681 aaPredicted RBP17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 BIN2Q9UBW5 565 aaPredicted RBP17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 GJD2Q9UKL4 321 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 ZBTB21Q9ULJ3 1066 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
HMBOX1-209ENST00000522468 ALPK3Q96L96 1907 aa17.18■□□□□ 0.34
HMBOX1-209ENST00000522468 SGPL1O95470 568 aa17.18■□□□□ 0.34
HMBOX1-209ENST00000522468 TMED8Q6PL24 325 aaPredicted RBP17.18■□□□□ 0.34
HMBOX1-209ENST00000522468 COA7Q96BR5 231 aa17.18■□□□□ 0.34
HMBOX1-209ENST00000522468 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
HMBOX1-209ENST00000522468 IDH1O75874 414 aaKnown RBP17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 GDF11O95390 407 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 FXR1P51114 621 aaKnown RBP eCLIP17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 MAGEB6Q8N7X4 407 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 MIGA1Q8NAN2 632 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 NAV1Q8NEY1 1877 aa17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 SAP30BPQ9UHR5 308 aaKnown RBP17.17■□□□□ 0.34
HMBOX1-209ENST00000522468 C19orf81C9J6K1 198 aa17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 POTEEQ6S8J3 1075 aa17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 AACSQ86V21 672 aa17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 CRACR2BQ8N4Y2 399 aaPredicted RBP17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 CRISPLD2Q9H0B8 497 aa17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 EHD4Q9H223 541 aa17.16■□□□□ 0.34
HMBOX1-209ENST00000522468 USP17L10C9JJH3 530 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 HLA-DOAP06340 250 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 CAPN2P17655 700 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 RHPN1Q8TCX5 695 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 EMILIN3Q9NT22 766 aa17.15■□□□□ 0.34
HMBOX1-209ENST00000522468 PEX10O60683 326 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 FARP2O94887 1054 aaPredicted RBP17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 HERVK_113P62684 666 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 MAP3K12Q12852 859 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 DEFB118Q96PH6 123 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 PRO3102Q9H379 93 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 TMOD4Q9NZQ9 345 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 RBPJLQ9UBG7 517 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 DNAH12Q6ZR08 3092 aa17.14■□□□□ 0.33
HMBOX1-209ENST00000522468 GH2P01242 217 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 HMGCRP04035 888 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 IRX3P78415 501 aaPredicted RBP17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 SERPINB13Q9UIV8 391 aa17.13■□□□□ 0.33
HMBOX1-209ENST00000522468 SHMT1P34896 483 aa17.12■□□□□ 0.33
HMBOX1-209ENST00000522468 USP5P45974 858 aa17.12■□□□□ 0.33
HMBOX1-209ENST00000522468 RPAP2Q8IXW5 612 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-209ENST00000522468 DPF3Q92784 378 aa17.12■□□□□ 0.33
HMBOX1-209ENST00000522468 HTATIP2Q9BUP3 242 aa17.12■□□□□ 0.33
HMBOX1-209ENST00000522468 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.12■□□□□ 0.335e-10■■■■■ 38.9
HMBOX1-209ENST00000522468 TCRBV5S4A2TA0A5A2 114 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 MS4A1P11836 297 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 PDE6AP16499 860 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 PLCD1P51178 756 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 GABPAQ06546 454 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 TRIM32Q13049 653 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 Q3C1V9 767 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 MAP3K21Q5TCX8 1036 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 TRIB2Q92519 343 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 USP6NLQ92738 828 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 RLFQ13129 1914 aa17.11■□□□□ 0.33
HMBOX1-209ENST00000522468 MYH7P12883 1935 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 ERVK-9P63128 1117 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 ERVK-24P63145 666 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 TTC6Q86TZ1 520 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 PORCNQ9H237 461 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 RPTORQ8N122 1335 aa17.1■□□□□ 0.33
HMBOX1-209ENST00000522468 MYH8P13535 1937 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 CNMDO75829 334 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 GUCY1A2P33402 732 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 EVX2Q03828 476 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 KIAA1683Q9H0B3 1180 aa17.09■□□□□ 0.33
HMBOX1-209ENST00000522468 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms