RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 UBE2Q2LH0YL09 131 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 GTF2IP78347 998 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 TUSC1Q2TAM9 212 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 STRIP1Q5VSL9 837 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 LYPD4Q6UWN0 246 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 KIAA0825Q8IV33 1275 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 OGFOD1Q8N543 542 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 CSRNP1Q96S65 589 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 INSM2Q96T92 566 aaPredicted RBP10.18□□□□□ -0.78
PVT1-213ENST00000522414 ANKRD2Q9GZV1 360 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 CHMP3Q9Y3E7 222 aa10.18□□□□□ -0.78
PVT1-213ENST00000522414 CASP8AP2Q9UKL3 1982 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 MED23Q9ULK4 1368 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 WNT10BO00744 389 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 CA12O43570 354 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 PLIN1O60240 522 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 TRPA1O75762 1119 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 SASH1O94885 1247 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 IGHA1P01876 353 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 KCNJ4P48050 445 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 IFIT5Q13325 482 aaKnown RBP10.17□□□□□ -0.78
PVT1-213ENST00000522414 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 LMBR1LQ6UX01 489 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 CD209Q9NNX6 404 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 RNF186Q9NXI6 227 aa10.17□□□□□ -0.78
PVT1-213ENST00000522414 A0A1B0GUL6 1792 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 MARSP56192 900 aaKnown RBP10.16□□□□□ -0.78
PVT1-213ENST00000522414 RELBQ01201 579 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 PRKG1Q13976 671 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 KCTD15Q96SI1 283 aaPredicted RBP10.16□□□□□ -0.78
PVT1-213ENST00000522414 MCOLN1Q9GZU1 580 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 JAG2Q9Y219 1238 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 PCDHAC2Q9Y5I4 1007 aa10.16□□□□□ -0.78
PVT1-213ENST00000522414 F8W031 263 aaPredicted RBP10.15□□□□□ -0.78
PVT1-213ENST00000522414 GRM8O00222 908 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 DGKZQ13574 1117 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 KANK3Q6NY19 840 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 LDHAL6AQ6ZMR3 332 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 CERS5Q8N5B7 392 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 RNF217Q8TC41 542 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 GPKOWQ92917 476 aaPredicted RBP eCLIP10.15□□□□□ -0.78
PVT1-213ENST00000522414 C9orf78Q9NZ63 289 aaPredicted RBP10.15□□□□□ -0.78
PVT1-213ENST00000522414 FZD1Q9UP38 647 aa10.15□□□□□ -0.78
PVT1-213ENST00000522414 SPEF2Q9C093 1822 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 PITPNM2Q9BZ72 1349 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 IRS2Q9Y4H2 1338 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 GAS6Q14393 721 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 CCDC57Q2TAC2 916 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 RASAL3Q86YV0 1011 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 KAZALD1Q96I82 304 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 PUS3Q9BZE2 481 aaKnown RBP10.14□□□□□ -0.79
PVT1-213ENST00000522414 CNNM1Q9NRU3 951 aa10.14□□□□□ -0.79
PVT1-213ENST00000522414 CUEDC1Q9NWM3 386 aaPredicted RBP10.14□□□□□ -0.79
PVT1-213ENST00000522414 MYO3BQ8WXR4 1341 aa10.13□□□□□ -0.79
PVT1-213ENST00000522414 ZNF521Q96K83 1311 aa10.13□□□□□ -0.79
PVT1-213ENST00000522414 NBPF7P0C2Y1 421 aaPredicted RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 FKBP1BP68106 108 aa10.13□□□□□ -0.79
PVT1-213ENST00000522414 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 TAF7LQ5H9L4 462 aa10.13□□□□□ -0.79
PVT1-213ENST00000522414 INTS6LQ5JSJ4 861 aaKnown RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 SUCLG2Q96I99 432 aa10.13□□□□□ -0.79
PVT1-213ENST00000522414 ZBED3Q96IU2 234 aaPredicted RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 ZNF395Q9H8N7 513 aaPredicted RBP10.13□□□□□ -0.79
PVT1-213ENST00000522414 AOX1Q06278 1338 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 TBC1D8O95759 1140 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 IL1R1P14778 569 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 CTDSPL2Q05D32 466 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 DLGAP5Q15398 846 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 C15orf52Q6ZUT6 534 aaKnown RBP10.12□□□□□ -0.79
PVT1-213ENST00000522414 SCARF2Q96GP6 870 aaPredicted RBP10.12□□□□□ -0.79
PVT1-213ENST00000522414 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 SRCIN1Q9C0H9 1055 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 POLMQ9NP87 494 aaPredicted RBP10.12□□□□□ -0.79
PVT1-213ENST00000522414 HDAC9Q9UKV0 1011 aa10.12□□□□□ -0.79
PVT1-213ENST00000522414 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 ALDH1L1O75891 902 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 CELA2BP08218 269 aaPredicted RBP10.11□□□□□ -0.79
PVT1-213ENST00000522414 GYG1P46976 350 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 FOXK2Q01167 660 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 CFAP100Q494V2 611 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 PDXDC2PQ6P474 469 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 FAM84BQ96KN1 310 aaPredicted RBP10.11□□□□□ -0.79
PVT1-213ENST00000522414 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 SAGE1Q9NXZ1 904 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 RIPOR2Q9Y4F9 1068 aa10.11□□□□□ -0.79
PVT1-213ENST00000522414 ITGB2P05107 769 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 MMP14P50281 582 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 RBM5P52756 815 aaKnown RBP eCLIP10.1□□□□□ -0.79
PVT1-213ENST00000522414 LRRC24Q50LG9 513 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 LDLRAD1Q5T700 205 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 XP32Q5T750 250 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
PVT1-213ENST00000522414 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 KLHDC4Q8TBB5 520 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 SSH1Q8WYL5 1049 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 R3HDMLQ9H3Y0 253 aa10.1□□□□□ -0.79
PVT1-213ENST00000522414 BICC1Q9H694 974 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms