RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZNF853P0CG23 659 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 MAP3K9P80192 1104 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 SULF1Q8IWU6 871 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 A0A1B0GUA9 196 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 TTC38Q5R3I4 469 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
USP42-207ENST00000521713 ARID4AP29374 1257 aaPredicted RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 PABPC4Q13310 644 aaKnown RBP eCLIP18.13■□□□□ 0.49
USP42-207ENST00000521713 SMCR8Q8TEV9 937 aaPredicted RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 PKD2L1Q9P0L9 805 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 PRPHP41219 470 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 BTDP43251 543 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 EDC3Q96F86 508 aaKnown RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 CCNT1O60563 726 aaKnown RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 ECM2O94769 699 aaPredicted RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 PRPF4BQ13523 1007 aaKnown RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 RSRC1Q96IZ7 334 aaKnown RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 VPS18Q9P253 973 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 CDC42BPGQ6DT37 1551 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 SEC24BO95487 1268 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 C10orf67Q8IYJ2 551 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 DCPSQ96C86 337 aaKnown RBP18.13■□□□□ 0.49
USP42-207ENST00000521713 SSH2Q76I76 1423 aa18.13■□□□□ 0.49
USP42-207ENST00000521713 MYCLP12524 364 aaPredicted RBP18.12■□□□□ 0.49
USP42-207ENST00000521713 KRT83P78385 493 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 MRVI1Q9Y6F6 885 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 IFT74Q96LB3 600 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 AFF2P51816 1311 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 ATP10DQ9P241 1426 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 FSD2A1L4K1 749 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 RPS6KA4O75676 772 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 PTGS1P23219 599 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 MSANTD4Q8NCY6 345 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 PPM1EQ8WY54 764 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 TTC14Q96N46 770 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 FAM47AQ5JRC9 791 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 B4GALNT4Q76KP1 1039 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 TRMT2AQ8IZ69 625 aaKnown RBP18.12■□□□□ 0.49
USP42-207ENST00000521713 ZNF654Q8IZM8 581 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 FBF1Q8TES7 1133 aa18.12■□□□□ 0.49
USP42-207ENST00000521713 TNS3Q68CZ2 1445 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 CUTAO60888 179 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 TACC1O75410 805 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 REXO1Q8N1G1 1221 aaKnown RBP18.11■□□□□ 0.49
USP42-207ENST00000521713 PLIN2Q99541 437 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 ARHGEF35A5YM69 484 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 PHKA1P46020 1223 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 SCNN1DP51172 638 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 FAM212AQ96EL1 285 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 CFBP00751 764 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 TXKP42681 527 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 CERKLQ49MI3 558 aaPredicted RBP18.11■□□□□ 0.49
USP42-207ENST00000521713 ERFEQ4G0M1 354 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 KRT40Q6A162 431 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 NEK11Q8NG66 645 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 CCDC17Q96LX7 622 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 CEP63Q96MT8 703 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 MYL10Q9BUA6 226 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 AZI2Q9H6S1 392 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 FRMD4BQ9Y2L6 1034 aa18.11■□□□□ 0.49
USP42-207ENST00000521713 LRWD1Q9UFC0 647 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 CEP83Q9Y592 693 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 CYP27B1O15528 508 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 CHMP2AO43633 222 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 HSP90AA4PQ58FG1 418 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 CNNM4Q6P4Q7 775 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 FAM76AQ8TAV0 307 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 ZNF274Q96GC6 653 aaPredicted RBP18.1■□□□□ 0.49
USP42-207ENST00000521713 ZSCAN10Q96SZ4 725 aaPredicted RBP18.1■□□□□ 0.49
USP42-207ENST00000521713 HSPD1P10809 573 aaKnown RBP18.1■□□□□ 0.49
USP42-207ENST00000521713 CA8P35219 290 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 KRT86O43790 486 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 CCDC93Q567U6 631 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
USP42-207ENST00000521713 KCNH3Q9ULD8 1083 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 EXOC7Q9UPT5 735 aa18.1■□□□□ 0.49
USP42-207ENST00000521713 KCNG1Q9UIX4 513 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 CCDC6Q16204 474 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 USH1GQ495M9 461 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 SELENOOQ9BVL4 669 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 A0A0D9SFI3 127 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 A0A1B0GVL5 298 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 STAP2Q9UGK3 403 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 STX17P56962 302 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 PHKBQ93100 1093 aa18.09■□□□□ 0.49
USP42-207ENST00000521713 ADGRB3O60242 1522 aa18.08■□□□□ 0.49
USP42-207ENST00000521713 KIFC2Q96AC6 838 aa18.08■□□□□ 0.49
USP42-207ENST00000521713 ABCA9Q8IUA7 1624 aa18.08■□□□□ 0.49
USP42-207ENST00000521713 RNF17Q9BXT8 1623 aaKnown RBP18.08■□□□□ 0.49
USP42-207ENST00000521713 NPR1P16066 1061 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms