RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 IGSF3O75054 1194 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 UQCRFS1P1P0C7P4 283 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 PRKAR2AP13861 404 aaKnown RBP14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 MTMR2Q13614 643 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 MORN1Q5T089 497 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 GORABQ5T7V8 394 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 TDHQ8IZJ6 230 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 DEFB123Q8N688 67 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 SOCS4Q8WXH5 440 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 LRP2BPQ9P2M1 347 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 STXBP5LQ9Y2K9 1186 aa14.17□□□□□ -0.14
IGHV3-60-201ENST00000521678 USP17L10C9JJH3 530 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 BAG3O95817 575 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 PLCG2P16885 1265 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 SYN1P17600 705 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 MAPK4P31152 587 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 EMILIN3Q9NT22 766 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 MTMR10Q9NXD2 777 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 LOC285556D6RIA3 1793 aa14.16□□□□□ -0.14
IGHV3-60-201ENST00000521678 ALPK3Q96L96 1907 aa14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 G3BP1Q13283 466 aaKnown RBP eCLIP14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 SHROOM1Q2M3G4 852 aaPredicted RBP14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 NAA16Q6N069 864 aaPredicted RBP14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 TGFBRAP1Q8WUH2 860 aa14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 ZNF512BQ96KM6 892 aaPredicted RBP14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 PORCNQ9H237 461 aa14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 AATFQ9NY61 560 aaKnown RBP eCLIP14.15□□□□□ -0.14
IGHV3-60-201ENST00000521678 PNMA6EA0A0J9YXQ4 647 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 GNAI2P04899 355 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 ERVK-9P63128 1117 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 ERVK-24P63145 666 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 Q7L0L9 218 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 ADGRA1Q86SQ6 560 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 GTF3C2Q8WUA4 911 aaPredicted RBP14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 FLT1P17948 1338 aa14.14□□□□□ -0.15
IGHV3-60-201ENST00000521678 PLXNB2O15031 1838 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 CYP2E1P05181 493 aaPredicted RBP14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 ZKSCAN1P17029 563 aaPredicted RBP14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 RGS2P41220 211 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 CCL14Q16627 93 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 LRRC26Q2I0M4 334 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 GPR142Q7Z601 462 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 PLEKHH3Q7Z736 793 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 MAPKAPK5Q8IW41 473 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 C12orf42Q96LP6 360 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 UBE2OQ9C0C9 1292 aaKnown RBP14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 ZBTB21Q9ULJ3 1066 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 RABGAP1Q9Y3P9 1069 aa14.13□□□□□ -0.15
IGHV3-60-201ENST00000521678 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 IGHA2P01877 340 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 CCND3P30281 292 aaPredicted RBP14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 POLA2Q14181 598 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 FAM109BQ6ICB4 259 aaPredicted RBP14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 TATDN1Q6P1N9 297 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L2Q6R6M4 530 aa14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 CRACR2BQ8N4Y2 399 aaPredicted RBP14.12□□□□□ -0.15
IGHV3-60-201ENST00000521678 IPO8O15397 1037 aaKnown RBP14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 CNMDO75829 334 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 GDF11O95390 407 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 HOXC6P09630 235 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 TRIM27P14373 513 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 MAP2K5Q13163 448 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 LBX2Q6XYB7 198 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 EDC3Q96F86 508 aaKnown RBP14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 APBA2Q99767 749 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 DBNDD2Q9BQY9 259 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L15C9J2P7 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L13C9JLJ4 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L11C9JVI0 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L18D6R9N7 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L22D6RA61 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L17D6RBQ6 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L19D6RCP7 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L20D6RJB6 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 USP17L24Q0WX57 530 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 CCDC158Q5M9N0 1113 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 ATF7IPQ6VMQ6 1270 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 CATSPERGQ6ZRH7 1159 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 PIH1D3Q9NQM4 214 aaKnown RBP14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 TNNQ9UQP3 1299 aa14.1□□□□□ -0.15
IGHV3-60-201ENST00000521678 SIPA1L1O43166 1804 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 SLC15A5A6NIM6 579 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 GH2P01242 217 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 PTPREP23469 700 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 ZAP70P43403 619 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 CCNA1P78396 465 aa14.09□□□□□ -0.15
IGHV3-60-201ENST00000521678 ATP8B2P98198 1209 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms