RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 YBX2Q9Y2T7 364 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 MTCH2Q9Y6C9 303 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 HERVK_113P62684 666 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 ERVK-9P63128 1117 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 ERVK-24P63145 666 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 FOXO4P98177 505 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 TMEM39AQ9NV64 488 aa9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
HMBOX1-208ENST00000521516 ENTPD3O75355 529 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 TIMP1P01033 207 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 SLC4A2P04920 1241 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 PPIGQ13427 754 aaKnown RBP eCLIP9.67□□□□□ -0.865e-7■□□□□ 8.6
HMBOX1-208ENST00000521516 LRRC41Q15345 812 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 LDHAL6AQ6ZMR3 332 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 SLC44A5Q8NCS7 719 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 HLA-CQ95604 372 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 FERMT2Q96AC1 680 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 TOX2Q96NM4 488 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 IDI2Q9BXS1 227 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 RFX7Q2KHR2 1363 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 CACNA1GO43497 2377 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 SLURP2P0DP57 97 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 CYP2C19P33261 490 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 IRX3P78415 501 aaPredicted RBP9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 FAAP100Q0VG06 881 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 MFSD5Q6N075 450 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 ANKRD33Q7Z3H0 272 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 ZFHX2Q9C0A1 2572 aaPredicted RBP9.67□□□□□ -0.86
HMBOX1-208ENST00000521516 SLC15A5A6NIM6 579 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 ATP2B2Q01814 1243 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 GJD3Q8N144 294 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 GTF3C2Q8WUA4 911 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 ZNF594Q96JF6 807 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 CNNM1Q9NRU3 951 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 USP40Q9NVE5 1235 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 ZNF521Q96K83 1311 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 SEPT4O43236 478 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 TBC1D12O60347 775 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 PQBP1O60828 265 aaKnown RBP9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 SLC5A1P13866 664 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 RGS3P49796 1198 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 PSRC1Q6PGN9 363 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 VPS37DQ86XT2 251 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 MBIPQ9NS73 344 aa9.66□□□□□ -0.86
HMBOX1-208ENST00000521516 KMT2BQ9UMN6 2715 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 GLRX3O76003 335 aaKnown RBP9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 PTPREP23469 700 aa9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 CCAR1Q8IX12 1150 aaKnown RBP9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 FAM178BQ8IXR5 827 aa9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 NPLOC4Q8TAT6 608 aa9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.86
HMBOX1-208ENST00000521516 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.87
HMBOX1-208ENST00000521516 A0A0G2JMZ2 1700 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 ZNF365Q70YC5 407 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 BRWD1Q9NSI6 2320 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 GBF1Q92538 1859 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 FRAT2O75474 233 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 ZNF853P0CG23 659 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 GRB14Q14449 540 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 ANO1Q5XXA6 986 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 PRSS33Q8NF86 280 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 MYH16Q9H6N6 1097 aa9.64□□□□□ -0.87
HMBOX1-208ENST00000521516 CCDC57Q2TAC2 916 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 CCDC30Q5VVM6 783 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 ANKS1AQ92625 1134 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 CHMP4AQ9BY43 222 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 USP17L5A8MUK1 530 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 DCDC2CA8MYV0 355 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 DCXO43602 365 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 GFRA3O60609 400 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 PTPN5P54829 565 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.63□□□□□ -0.871e-20■■■■■ 55.6
HMBOX1-208ENST00000521516 CHMP3Q9Y3E7 222 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 PCDHA11Q9Y5I1 949 aa9.63□□□□□ -0.87
HMBOX1-208ENST00000521516 PKD1L2Q7Z442 2459 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 A0A1W2PQ45 241 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 A0A1W2PQY0 241 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 ELL2O00472 640 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 CNMDO75829 334 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 RGS20O76081 388 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 CSF2RAP15509 400 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 BACE1P56817 501 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 TAF7LQ5H9L4 462 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 FAM47AQ5JRC9 791 aa9.62□□□□□ -0.87
HMBOX1-208ENST00000521516 LMBR1LQ6UX01 489 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms