RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 C7orf69Q9H7B7 122 aa10.14□□□□□ -0.79
NUDCD1-204ENST00000521439 FAM105AQ9NUU6 356 aa10.14□□□□□ -0.79
NUDCD1-204ENST00000521439 MEIS3P2A8K0S8 358 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 NEFMP07197 916 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 BEND4Q6ZU67 534 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 LSRQ86X29 649 aaPredicted RBP10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 KCT2Q8NC54 265 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 ANTXR1Q9H6X2 564 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 GMIPQ9P107 970 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 PRKAG3Q9UGI9 489 aa10.13□□□□□ -0.79
NUDCD1-204ENST00000521439 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 SLC22A31A6NKX4 558 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 RNGTTO60942 597 aaKnown RBP10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 MAP4P27816 1152 aaKnown RBP10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 ANKS3Q6ZW76 656 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 HID1Q8IV36 788 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 ISL2Q96A47 359 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 ACSF2Q96CM8 615 aaPredicted RBP10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 TJP2Q9UDY2 1190 aa10.12□□□□□ -0.79
NUDCD1-204ENST00000521439 HMX2A2RU54 273 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 SMAD7O15105 426 aaKnown RBP10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 USP11P51784 963 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 SGO2Q562F6 1265 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 TNNI3KQ59H18 835 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 MCATQ8IVS2 390 aaKnown RBP10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 SMYD4Q8IYR2 804 aaPredicted RBP10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 FAM169BQ8N8A8 192 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 PMFBP1Q8TBY8 1022 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 YIPF2Q9BWQ6 316 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 FBRSQ9HAH7 460 aa10.11□□□□□ -0.79
NUDCD1-204ENST00000521439 DNAJA2O60884 412 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 RXRBP28702 533 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 NFIAQ12857 509 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 NBPF6Q5VWK0 638 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 RNF43Q68DV7 783 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 TMEM87BQ96K49 555 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 NBPF4Q96M43 638 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 TM9SF2Q99805 663 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 SSU72Q9NP77 194 aaKnown RBP10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 KLHL3Q9UH77 587 aa10.1□□□□□ -0.79
NUDCD1-204ENST00000521439 LOC100996750A0A140TA64 210 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 CHURC1-FNTBB4DL54 471 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 CDCP2Q5VXM1 449 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 OVOS1Q6IE37 1185 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 DPH6Q7L8W6 267 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 DBNDD2Q9BQY9 259 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 KRTAP4-6Q9BYQ5 205 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 LNPKQ9C0E8 428 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 ACSS3Q9H6R3 686 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 PCOLCE2Q9UKZ9 415 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 RNF112Q9ULX5 631 aa10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 R3HCC1Q9Y3T6 440 aaKnown RBP10.09□□□□□ -0.79
NUDCD1-204ENST00000521439 KLF4O43474 513 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 RAB6AP20340 208 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 CAP2P40123 477 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 YARSP54577 528 aaKnown RBP10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 NKG7Q16617 165 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 RUFY4Q6ZNE9 571 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 UBE3DQ7Z6J8 389 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 TAB3Q8N5C8 712 aaPredicted RBP10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 FAM13CQ8NE31 585 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 CNNM2Q9H8M5 875 aa10.08□□□□□ -0.8
NUDCD1-204ENST00000521439 FAM95CA0A1B0GW59 222 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 UPK3BL1B0FP48 263 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 UPK3BL2E5RIL1 263 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 NME1P15531 152 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 GUCY2CP25092 1073 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 CASP7P55210 303 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 ARSHQ5FYA8 562 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 INTS3Q68E01 1043 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 NLRC3Q7RTR2 1065 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 SLFN12Q8IYM2 578 aa10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 C19orf47Q8N9M1 422 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 HNRNPLLQ8WVV9 542 aaKnown RBP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
NUDCD1-204ENST00000521439 SCO2A0A1W2PP80 73 aa10.06□□□□□ -0.8
NUDCD1-204ENST00000521439 RAB33AQ14088 237 aa10.06□□□□□ -0.8
NUDCD1-204ENST00000521439 PAOXQ6QHF9 649 aa10.06□□□□□ -0.8
NUDCD1-204ENST00000521439 FBLIM1Q8WUP2 373 aa10.06□□□□□ -0.8
NUDCD1-204ENST00000521439 SEMA6CQ9H3T2 930 aa10.06□□□□□ -0.8
NUDCD1-204ENST00000521439 TNFRSF10CO14798 259 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 RAG1P15918 1043 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 PPP2R5EQ16537 467 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 Q8N3U1 123 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 TRIM55Q9BYV6 548 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 ACTR10Q9NZ32 417 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 DAGLAQ9Y4D2 1042 aa10.05□□□□□ -0.8
NUDCD1-204ENST00000521439 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 NFICP08651 508 aa10.04□□□□□ -0.8
NUDCD1-204ENST00000521439 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms