RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 APOBEC3HQ6NTF7 200 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 HFE2Q6ZVN8 426 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 TRPV1Q8NER1 839 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 ANKRD2Q9GZV1 360 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 FLRT1Q9NZU1 646 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 DDX20Q9UHI6 824 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 COG5Q9UP83 839 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 AGTPBP1Q9UPW5 1226 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 MTCH2Q9Y6C9 303 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 FAM186AA6NE01 2351 aa9.36□□□□□ -0.91
CTNNA1-227ENST00000521387 PTPRFP10586 1907 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 RFXAPO00287 272 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 POU3F3P20264 500 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 FPGSQ05932 587 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 TMEM240Q5SV17 173 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 FKBP1CQ5VVH2 108 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 KRT40Q6A162 431 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 CCDC84Q86UT8 332 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 GJD3Q8N144 294 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 CCDC191Q8NCU4 936 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 TACC3Q9Y6A5 838 aa9.35□□□□□ -0.91
CTNNA1-227ENST00000521387 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 TCF15Q12870 199 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 MORN1Q5T089 497 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 FAM178BQ8IXR5 827 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 TDRD7Q8NHU6 1098 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 MYD88Q99836 296 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 ALG13Q9NP73 1137 aaKnown RBP9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 MORF4L1Q9UBU8 362 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 DLG5Q8TDM6 1919 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 DMDP11532 3685 aa9.34□□□□□ -0.91
CTNNA1-227ENST00000521387 IGHA2P01877 340 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 CLTBP09497 229 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 ALADP13716 330 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 KCNJ4P48050 445 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 GCLCP48506 637 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 CSPP1Q1MSJ5 1256 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 SCYL3Q8IZE3 742 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 HLA-CQ95604 372 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 TXNRD2Q9NNW7 524 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 DBF4Q9UBU7 674 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 ACACBO00763 2458 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 ATRNL1Q5VV63 1379 aa9.33□□□□□ -0.92
CTNNA1-227ENST00000521387 DNAH14Q0VDD8 3507 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 GVINP1Q7Z2Y8 2422 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 MED19A0JLT2 244 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 EPOPA6NHQ4 379 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 TRIM75PA6NK02 468 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 MYOGP15173 224 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 RAG1P15918 1043 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 IGHMBP2P38935 993 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ADCYAP1R1P41586 468 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 RALBP1Q15311 655 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 Q3C1V9 767 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ARSIQ5FYB1 569 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ZNF804AQ7Z570 1209 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ZFPM1Q8IX07 1006 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 EFCAB3Q8N7B9 438 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 FAM151AQ8WW52 585 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 FERMT2Q96AC1 680 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ZDHHC15Q96MV8 337 aa9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 ASCC2Q9H1I8 757 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 CWC25Q9NXE8 425 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-227ENST00000521387 MYBBP1AQ9BQG0 1328 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 PHIPQ8WWQ0 1821 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 NFIAQ12857 509 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 RAB30Q15771 203 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 PLEKHF1Q96S99 279 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 PORCNQ9H237 461 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 FAM86C1Q9NVL1 165 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 MSRAQ9UJ68 235 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 TECTAO75443 2155 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
CTNNA1-227ENST00000521387 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 DCXO43602 365 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 ITGA6P23229 1130 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 RGS2P41220 211 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 RABGGTBP53611 331 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 PTPN5P54829 565 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 TCP10Q12799 353 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 ANO1Q5XXA6 986 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 ZNF365Q70YC5 407 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 APBA2Q99767 749 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 PNMA3Q9UL41 463 aa9.3□□□□□ -0.92
CTNNA1-227ENST00000521387 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms