RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 GDF11O95390 407 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 GNAI2P04899 355 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
SPARC-203ENST00000521327 PLCG2P16885 1265 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 PPP4CP60510 307 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 Q3C1V9 767 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
SPARC-203ENST00000521327 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 DNAJC18Q9H819 358 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
SPARC-203ENST00000521327 MAPK4P31152 587 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
SPARC-203ENST00000521327 TTC39AQ5SRH9 613 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 Q7L0L9 218 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 ADGRA1Q86SQ6 560 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.25
SPARC-203ENST00000521327 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
SPARC-203ENST00000521327 LRIT3Q3SXY7 679 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 METTL16Q86W50 562 aaKnown RBP16.63■□□□□ 0.25
SPARC-203ENST00000521327 TRMT44Q8IYL2 757 aaKnown RBP16.63■□□□□ 0.25
SPARC-203ENST00000521327 TDHQ8IZJ6 230 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
SPARC-203ENST00000521327 PORCNQ9H237 461 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 SAP30BPQ9UHR5 308 aaKnown RBP16.63■□□□□ 0.25
SPARC-203ENST00000521327 ZBTB21Q9ULJ3 1066 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 PFASO15067 1338 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 FLT1P17948 1338 aa16.63■□□□□ 0.25
SPARC-203ENST00000521327 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
SPARC-203ENST00000521327 TRIM27P14373 513 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 CCND3P30281 292 aaPredicted RBP16.62■□□□□ 0.25
SPARC-203ENST00000521327 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 ERVK-24P63145 666 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 CCL14Q16627 93 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 USP6NLQ92738 828 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 EMILIN3Q9NT22 766 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 GINM1Q9NU53 330 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 PTPRFP10586 1907 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
SPARC-203ENST00000521327 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
SPARC-203ENST00000521327 COL6A1P12109 1028 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 RGS2P41220 211 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 MORN1Q5T089 497 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 LHX8Q68G74 356 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
SPARC-203ENST00000521327 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
SPARC-203ENST00000521327 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 DYNLL1P63167 89 aaKnown RBP16.6■□□□□ 0.25
SPARC-203ENST00000521327 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
SPARC-203ENST00000521327 LRRC26Q2I0M4 334 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 TNNI3KQ59H18 835 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 USP17L2Q6R6M4 530 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
SPARC-203ENST00000521327 CWC22Q9HCG8 908 aaKnown RBP16.6■□□□□ 0.25
SPARC-203ENST00000521327 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 FPGT-TNNI3KV9GXZ4 949 aa16.6■□□□□ 0.25
SPARC-203ENST00000521327 GH2P01242 217 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 ZAP70P43403 619 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 MDM2Q00987 491 aaPredicted RBP16.59■□□□□ 0.25
SPARC-203ENST00000521327 APBA2Q99767 749 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
SPARC-203ENST00000521327 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 STXBP5LQ9Y2K9 1186 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
SPARC-203ENST00000521327 BCAR3O75815 825 aa16.58■□□□□ 0.24
SPARC-203ENST00000521327 CYP7A1P22680 504 aa16.58■□□□□ 0.24
SPARC-203ENST00000521327 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
SPARC-203ENST00000521327 WDR78Q5VTH9 848 aa16.58■□□□□ 0.24
SPARC-203ENST00000521327 EDC3Q96F86 508 aaKnown RBP16.58■□□□□ 0.24
SPARC-203ENST00000521327 RABGAP1Q9Y3P9 1069 aa16.58■□□□□ 0.24
SPARC-203ENST00000521327 LOC285556D6RIA3 1793 aa16.58■□□□□ 0.24
SPARC-203ENST00000521327 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
SPARC-203ENST00000521327 CCNA1P78396 465 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 MAP2K5Q13163 448 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 POLA2Q14181 598 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
SPARC-203ENST00000521327 FEZ1Q99689 392 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 CUL9Q8IWT3 2517 aa16.57■□□□□ 0.24
SPARC-203ENST00000521327 CNMDO75829 334 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms