RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 CRHR2Q13324 411 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 ANKRD23Q86SG2 305 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 MIGA1Q8NAN2 632 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 RIOK1Q9BRS2 568 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
TRAPPC9-209ENST00000521167 MAGEB6P1A0A0J9YX57 407 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 BTBD19C9JJ37 291 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 CAP2P40123 477 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 USP5P45974 858 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 ZSCAN25Q6NSZ9 544 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 FASTKD5Q7L8L6 764 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 PALD1Q9ULE6 856 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 ZNF532Q9HCE3 1301 aa12.59□□□□□ -0.39
TRAPPC9-209ENST00000521167 SLURP2P0DP57 97 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 ADD2P35612 726 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 SP3Q02447 781 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 MOGSQ13724 837 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 CRACR2BQ8N4Y2 399 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 EDC3Q96F86 508 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 ERO1AQ96HE7 468 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 TRIM34Q9BYJ4 488 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 CRNKL1Q9BZJ0 848 aaKnown RBP12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
TRAPPC9-209ENST00000521167 A0A0G2JLL6 359 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 FAM196BA6NMK8 535 aa12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 TLR2O60603 784 aa12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 ARHGEF6Q15052 776 aa12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 PRRT2Q7Z6L0 340 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 EHD4Q9H223 541 aa12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 SAP30BPQ9UHR5 308 aaKnown RBP12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
TRAPPC9-209ENST00000521167 MYH8P13535 1937 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 BAZ2AQ9UIF9 1905 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 POTEMA6NI47 508 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 PDHXO00330 501 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 ERC2O15083 957 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 ASNSP08243 561 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 RRP1BQ14684 758 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 GPAT2Q6NUI2 795 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 SLC45A1Q9Y2W3 748 aa12.56□□□□□ -0.4
TRAPPC9-209ENST00000521167 POLR3DP05423 398 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 LRRFIP1Q32MZ4 808 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 FBXO46Q6PJ61 603 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 KBTBD3Q8NAB2 608 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 RWDD1Q9H446 243 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 ATP8A2Q9NTI2 1148 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
TRAPPC9-209ENST00000521167 TRIM75PA6NK02 468 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 SPP2Q13103 211 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 OTOP1Q7RTM1 612 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 CD99L2Q8TCZ2 262 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 TMEM121BQ9BXQ6 578 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 ARMT1Q9H993 441 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 EFCC1Q9HA90 598 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 DOCK3Q8IZD9 2030 aa12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 DDX60LQ5H9U9 1706 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-209ENST00000521167 MGAMO43451 1857 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 C19orf81C9J6K1 198 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 RNF113AO15541 343 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 MBD4O95243 580 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 GNRH1P01148 92 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 MX1P20591 662 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 PLCD1P51178 756 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 KIF22Q14807 665 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
TRAPPC9-209ENST00000521167 ADGRA2Q96PE1 1338 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms