RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
TRAM1-204ENST00000521049 PRKAR2AP13861 404 aaKnown RBP20.18■□□□□ 0.82
TRAM1-204ENST00000521049 MAGEA10P43363 369 aaPredicted RBP20.18■□□□□ 0.82
TRAM1-204ENST00000521049 JAG1P78504 1218 aa20.18■□□□□ 0.82
TRAM1-204ENST00000521049 NAA16Q6N069 864 aaPredicted RBP20.18■□□□□ 0.82
TRAM1-204ENST00000521049 GTF3C2Q8WUA4 911 aaPredicted RBP20.18■□□□□ 0.82
TRAM1-204ENST00000521049 USP6NLQ92738 828 aa20.18■□□□□ 0.82
TRAM1-204ENST00000521049 TXNRD2Q9NNW7 524 aa20.18■□□□□ 0.82
TRAM1-204ENST00000521049 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
TRAM1-204ENST00000521049 GNAI2P04899 355 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 SYN1P17600 705 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 Q3C1V9 767 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 TDHQ8IZJ6 230 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 DEFB123Q8N688 67 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 TGFBRAP1Q8WUH2 860 aa20.17■□□□□ 0.82
TRAM1-204ENST00000521049 COL6A1P12109 1028 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 CACNB2Q08289 660 aaPredicted RBP20.16■□□□□ 0.82
TRAM1-204ENST00000521049 PDE3AQ14432 1141 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 DNAJC18Q9H819 358 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 GPR108Q9NPR9 543 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 LOC285556D6RIA3 1793 aa20.16■□□□□ 0.82
TRAM1-204ENST00000521049 LAMA3Q16787 3333 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
TRAM1-204ENST00000521049 PEX10O60683 326 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
TRAM1-204ENST00000521049 ERVK-9P63128 1117 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 ERVK-24P63145 666 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 MORN1Q5T089 497 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 LHX8Q68G74 356 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 MAPKAPK5Q8IW41 473 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 CCAR1Q8IX12 1150 aaKnown RBP20.15■□□□□ 0.82
TRAM1-204ENST00000521049 CRACR2BQ8N4Y2 399 aaPredicted RBP20.15■□□□□ 0.82
TRAM1-204ENST00000521049 UBE2OQ9C0C9 1292 aaKnown RBP20.15■□□□□ 0.82
TRAM1-204ENST00000521049 PFASO15067 1338 aa20.15■□□□□ 0.82
TRAM1-204ENST00000521049 FLT1P17948 1338 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 PNMA6EA0A0J9YXQ4 647 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 RGS2P41220 211 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 CCDC158Q5M9N0 1113 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 GPR142Q7Z601 462 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 PLEKHH3Q7Z736 793 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 SNRKQ9NRH2 765 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 EMILIN3Q9NT22 766 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 PALD1Q9ULE6 856 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 ZBTB21Q9ULJ3 1066 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 STXBP5LQ9Y2K9 1186 aa20.14■□□□□ 0.81
TRAM1-204ENST00000521049 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
TRAM1-204ENST00000521049 ATF7IPQ6VMQ6 1270 aa20.13■□□□□ 0.81
TRAM1-204ENST00000521049 ZNF512BQ96KM6 892 aaPredicted RBP20.13■□□□□ 0.81
TRAM1-204ENST00000521049 PORCNQ9H237 461 aa20.13■□□□□ 0.81
TRAM1-204ENST00000521049 MTMR10Q9NXD2 777 aa20.13■□□□□ 0.81
TRAM1-204ENST00000521049 GDF11O95390 407 aa20.12■□□□□ 0.81
TRAM1-204ENST00000521049 CYP2E1P05181 493 aaPredicted RBP20.12■□□□□ 0.81
TRAM1-204ENST00000521049 HLA-DOAP06340 250 aa20.12■□□□□ 0.81
TRAM1-204ENST00000521049 POTEEQ6S8J3 1075 aa20.12■□□□□ 0.81
TRAM1-204ENST00000521049 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
TRAM1-204ENST00000521049 COL6A3P12111 3177 aa20.12■□□□□ 0.81
TRAM1-204ENST00000521049 TRIM27P14373 513 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 CCND3P30281 292 aaPredicted RBP20.11■□□□□ 0.81
TRAM1-204ENST00000521049 CCL14Q16627 93 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 SHROOM1Q2M3G4 852 aaPredicted RBP20.11■□□□□ 0.81
TRAM1-204ENST00000521049 TNNI3KQ59H18 835 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 Q7L0L9 218 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 C12orf42Q96LP6 360 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 APBA2Q99767 749 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 RABGAP1Q9Y3P9 1069 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 FPGT-TNNI3KV9GXZ4 949 aa20.11■□□□□ 0.81
TRAM1-204ENST00000521049 ALPK3Q96L96 1907 aa20.1■□□□□ 0.81
TRAM1-204ENST00000521049 GLRX3O76003 335 aaKnown RBP20.1■□□□□ 0.81
TRAM1-204ENST00000521049 EDC3Q96F86 508 aaKnown RBP20.1■□□□□ 0.81
TRAM1-204ENST00000521049 DBNDD2Q9BQY9 259 aa20.1■□□□□ 0.81
TRAM1-204ENST00000521049 PAGR1Q9BTK6 254 aa20.1■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L15C9J2P7 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L13C9JLJ4 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L11C9JVI0 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L18D6R9N7 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L22D6RA61 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L17D6RBQ6 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L19D6RCP7 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L20D6RJB6 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 CCNA1P78396 465 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 USP17L24Q0WX57 530 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 MAP2K5Q13163 448 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 POLA2Q14181 598 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 LRRC26Q2I0M4 334 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 TATDN1Q6P1N9 297 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
TRAM1-204ENST00000521049 PLXNB2O15031 1838 aa20.09■□□□□ 0.81
TRAM1-204ENST00000521049 GH2P01242 217 aa20.08■□□□□ 0.81
TRAM1-204ENST00000521049 ZAP70P43403 619 aa20.08■□□□□ 0.81
TRAM1-204ENST00000521049 MFSD14CQ5VZR4 134 aa20.08■□□□□ 0.81
TRAM1-204ENST00000521049 CERS3Q8IU89 383 aa20.08■□□□□ 0.81
TRAM1-204ENST00000521049 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.81
TRAM1-204ENST00000521049 A0A0C4DFX4 3053 aa20.08■□□□□ 0.8
TRAM1-204ENST00000521049 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
TRAM1-204ENST00000521049 CNMDO75829 334 aa20.07■□□□□ 0.8
TRAM1-204ENST00000521049 USP14P54578 494 aa20.07■□□□□ 0.8
TRAM1-204ENST00000521049 DYNLL1P63167 89 aaKnown RBP20.07■□□□□ 0.8
TRAM1-204ENST00000521049 ATP8B2P98198 1209 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms