RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TMOD4Q9NZQ9 345 aa19.22■□□□□ 0.67
CLN8-205ENST00000520991 BIN2Q9UBW5 565 aaPredicted RBP19.22■□□□□ 0.67
CLN8-205ENST00000520991 MAGEB6P1A0A0J9YX57 407 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 GOLIM4O00461 696 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 PDE6AP16499 860 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 BACE1P56817 501 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 SH3D19Q5HYK7 790 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 SLC9C2Q5TAH2 1124 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 ZBTB21Q9ULJ3 1066 aa19.21■□□□□ 0.67
CLN8-205ENST00000520991 MYH1P12882 1939 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 GCLCP48506 637 aaPredicted RBP19.2■□□□□ 0.66
CLN8-205ENST00000520991 JAG1P78504 1218 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 FAM110CQ1W6H9 321 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 SHROOM1Q2M3G4 852 aaPredicted RBP19.2■□□□□ 0.66
CLN8-205ENST00000520991 SLAIN1Q8ND83 568 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
CLN8-205ENST00000520991 ASCC2Q9H1I8 757 aaPredicted RBP19.2■□□□□ 0.66
CLN8-205ENST00000520991 SERPINB13Q9UIV8 391 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 GABRQQ9UN88 632 aa19.2■□□□□ 0.66
CLN8-205ENST00000520991 FLT3LGP49771 235 aa19.19■□□□□ 0.66
CLN8-205ENST00000520991 UBXN2AP68543 259 aa19.19■□□□□ 0.66
CLN8-205ENST00000520991 IRX3P78415 501 aaPredicted RBP19.19■□□□□ 0.66
CLN8-205ENST00000520991 MTFR1Q15390 333 aa19.19■□□□□ 0.66
CLN8-205ENST00000520991 TTC6Q86TZ1 520 aa19.19■□□□□ 0.66
CLN8-205ENST00000520991 COA7Q96BR5 231 aa19.19■□□□□ 0.66
CLN8-205ENST00000520991 CRNKL1Q9BZJ0 848 aaKnown RBP19.19■□□□□ 0.66
CLN8-205ENST00000520991 C19orf81C9J6K1 198 aa19.18■□□□□ 0.66
CLN8-205ENST00000520991 USP17L10C9JJH3 530 aa19.18■□□□□ 0.66
CLN8-205ENST00000520991 GH2P01242 217 aa19.18■□□□□ 0.66
CLN8-205ENST00000520991 EHD4Q9H223 541 aa19.18■□□□□ 0.66
CLN8-205ENST00000520991 ZNF532Q9HCE3 1301 aa19.18■□□□□ 0.66
CLN8-205ENST00000520991 ADCY3O60266 1144 aa19.17■□□□□ 0.66
CLN8-205ENST00000520991 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
CLN8-205ENST00000520991 EDC3Q96F86 508 aaKnown RBP19.17■□□□□ 0.66
CLN8-205ENST00000520991 LRRCC1Q9C099 1032 aa19.17■□□□□ 0.66
CLN8-205ENST00000520991 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
CLN8-205ENST00000520991 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
CLN8-205ENST00000520991 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
CLN8-205ENST00000520991 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
CLN8-205ENST00000520991 CCL5P13501 91 aa19.16■□□□□ 0.66
CLN8-205ENST00000520991 ATP5JP18859 108 aa19.16■□□□□ 0.66
CLN8-205ENST00000520991 TATDN1Q6P1N9 297 aa19.16■□□□□ 0.66
CLN8-205ENST00000520991 RNF208Q9H0X6 261 aa19.16■□□□□ 0.66
CLN8-205ENST00000520991 HOXA7P31268 230 aaPredicted RBP19.15■□□□□ 0.66
CLN8-205ENST00000520991 IRF5Q13568 498 aa19.15■□□□□ 0.66
CLN8-205ENST00000520991 RAB3GAP1Q15042 981 aa19.15■□□□□ 0.66
CLN8-205ENST00000520991 CERKLQ49MI3 558 aaPredicted RBP19.15■□□□□ 0.66
CLN8-205ENST00000520991 NKX2-3Q8TAU0 364 aa19.15■□□□□ 0.66
CLN8-205ENST00000520991 FEZ1Q99689 392 aa19.15■□□□□ 0.66
CLN8-205ENST00000520991 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLN8-205ENST00000520991 DDX60LQ5H9U9 1706 aaKnown RBP19.14■□□□□ 0.65
CLN8-205ENST00000520991 TCRBV5S4A2TA0A5A2 114 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 ELNP15502 786 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 PLCD1P51178 756 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 ABCB5Q2M3G0 1257 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 USP17L2Q6R6M4 530 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 LCORLQ8N3X6 602 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 HAUS7Q99871 368 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 CABP5Q9NP86 173 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 MCM9Q9NXL9 1143 aa19.14■□□□□ 0.65
CLN8-205ENST00000520991 HERVK_113P62684 666 aa19.13■□□□□ 0.65
CLN8-205ENST00000520991 ZYXQ15942 572 aaKnown RBP19.13■□□□□ 0.65
CLN8-205ENST00000520991 PXYLP1Q8TE99 480 aa19.13■□□□□ 0.65
CLN8-205ENST00000520991 SDR42E1Q8WUS8 393 aa19.13■□□□□ 0.65
CLN8-205ENST00000520991 P2RX7Q99572 595 aaKnown RBP19.13■□□□□ 0.65
CLN8-205ENST00000520991 MORF4L1Q9UBU8 362 aa19.13■□□□□ 0.65
CLN8-205ENST00000520991 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
CLN8-205ENST00000520991 SLC34A2O95436 690 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 INHAP05111 366 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 GJB1P08034 283 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 SHMT1P34896 483 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 ADD2P35612 726 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 GJA8P48165 433 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 SHISA4Q96DD7 197 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 UNC93B1Q9H1C4 597 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 ARMT1Q9H993 441 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 EMILIN3Q9NT22 766 aa19.12■□□□□ 0.65
CLN8-205ENST00000520991 MBD4O95243 580 aa19.11■□□□□ 0.65
CLN8-205ENST00000520991 USP14P54578 494 aa19.11■□□□□ 0.65
CLN8-205ENST00000520991 GPRC5AQ8NFJ5 357 aa19.11■□□□□ 0.65
CLN8-205ENST00000520991 GCC1Q96CN9 775 aa19.11■□□□□ 0.65
CLN8-205ENST00000520991 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
CLN8-205ENST00000520991 MPHOSPH10O00566 681 aaKnown RBP19.1■□□□□ 0.65
CLN8-205ENST00000520991 SLFNL1Q499Z3 407 aa19.1■□□□□ 0.65
CLN8-205ENST00000520991 GTF3C2Q8WUA4 911 aaPredicted RBP19.1■□□□□ 0.65
CLN8-205ENST00000520991 GABPAQ06546 454 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
CLN8-205ENST00000520991 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
CLN8-205ENST00000520991 GPATCH3Q96I76 525 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 C12orf42Q96LP6 360 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 PAGR1Q9BTK6 254 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 KIAA1683Q9H0B3 1180 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
CLN8-205ENST00000520991 USP17L15C9J2P7 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L13C9JLJ4 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L11C9JVI0 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L18D6R9N7 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L22D6RA61 530 aa19.08■□□□□ 0.65
CLN8-205ENST00000520991 USP17L17D6RBQ6 530 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms