RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 OSBPL5Q9H0X9 879 aaPredicted RBP21.8■■□□□ 1.08
VEGFA-222ENST00000520948 ATRNL1Q5VV63 1379 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 DDTLA6NHG4 134 aaPredicted RBP21.79■■□□□ 1.08
VEGFA-222ENST00000520948 M0R2C6 588 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 PSMC4P43686 418 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 MOGSQ13724 837 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 NOL9Q5SY16 702 aaKnown RBP21.79■■□□□ 1.08
VEGFA-222ENST00000520948 TRIM47Q96LD4 638 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 CRNKL1Q9BZJ0 848 aaKnown RBP21.79■■□□□ 1.08
VEGFA-222ENST00000520948 HELLSQ9NRZ9 838 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 FLT1P17948 1338 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 ADGRA2Q96PE1 1338 aa21.79■■□□□ 1.08
VEGFA-222ENST00000520948 PRKAB2O43741 272 aa21.78■■□□□ 1.08
VEGFA-222ENST00000520948 GNRH1P01148 92 aa21.78■■□□□ 1.08
VEGFA-222ENST00000520948 MAP3K10Q02779 954 aa21.78■■□□□ 1.08
VEGFA-222ENST00000520948 MAPKAPK5Q8IW41 473 aa21.78■■□□□ 1.08
VEGFA-222ENST00000520948 MGAMO43451 1857 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 OSBPP22059 807 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 MTFR1Q15390 333 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 BMP2KLQ5H9B9 411 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 FAM227BQ96M60 508 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 SRRDQ9UH36 339 aa21.77■■□□□ 1.08
VEGFA-222ENST00000520948 MYH1P12882 1939 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 A0A0D9SFI3 127 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 GPAA1O43292 621 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 FMNL1O95466 1100 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 SLURP2P0DP57 97 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 CYP2C8P10632 490 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 PRMT2P55345 433 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 NMIQ13287 307 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 DOCK1Q14185 1865 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 DDX60LQ5H9U9 1706 aaKnown RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 ZSCAN29Q8IWY8 852 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 SDR42E1Q8WUS8 393 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 DHX36Q9H2U1 1008 aaKnown RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 DCP1AQ9NPI6 582 aaPredicted RBP21.76■■□□□ 1.07
VEGFA-222ENST00000520948 ATP8A2Q9NTI2 1148 aa21.76■■□□□ 1.07
VEGFA-222ENST00000520948 PTPRFP10586 1907 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 GSG1L2A8MUP6 293 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 PHF20L1A8MW92 1017 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 HIP1O00291 1037 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 USP5P45974 858 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 MCMDC2Q4G0Z9 681 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 GPAT2Q6NUI2 795 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 RAET1EQ8TD07 263 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 PARK7Q99497 189 aaKnown RBP21.75■■□□□ 1.07
VEGFA-222ENST00000520948 MYPNQ86TC9 1320 aa21.75■■□□□ 1.07
VEGFA-222ENST00000520948 SIPA1L1O43166 1804 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 PHIPQ8WWQ0 1821 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 METTL16Q86W50 562 aaKnown RBP21.74■■□□□ 1.07
VEGFA-222ENST00000520948 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 PICK1Q9NRD5 415 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 SLC4A4Q9Y6R1 1079 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 ZHX2Q9Y6X8 837 aa21.74■■□□□ 1.07
VEGFA-222ENST00000520948 PATL2C9JE40 543 aaKnown RBP21.73■■□□□ 1.07
VEGFA-222ENST00000520948 CXCL11O14625 94 aa21.73■■□□□ 1.07
VEGFA-222ENST00000520948 TBC1D12O60347 775 aa21.73■■□□□ 1.07
VEGFA-222ENST00000520948 GNAT2P19087 354 aa21.73■■□□□ 1.07
VEGFA-222ENST00000520948 CHMLP26374 656 aa21.73■■□□□ 1.07
VEGFA-222ENST00000520948 SHISA4Q96DD7 197 aa21.73■■□□□ 1.07
VEGFA-222ENST00000520948 FOXP2O15409 715 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 PTPRAP18433 802 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 HOXD10P28358 340 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 GRK4P32298 578 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 GIMAP6Q6P9H5 292 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 GADL1Q6ZQY3 521 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 CCDC129Q6ZRS4 1044 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-222ENST00000520948 PI4KBQ9UBF8 816 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 COLQQ9Y215 455 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-222ENST00000520948 NAV1Q8NEY1 1877 aa21.72■■□□□ 1.07
VEGFA-222ENST00000520948 BAZ2AQ9UIF9 1905 aaKnown RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 A0A0G2JLL6 359 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 H0YGN5 161 aa21.71■■□□□ 1.07
VEGFA-222ENST00000520948 BCRP11274 1271 aa21.71■■□□□ 1.07
VEGFA-222ENST00000520948 PRKCZQ05513 592 aa21.71■■□□□ 1.07
VEGFA-222ENST00000520948 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 PRRT2Q7Z6L0 340 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 ZNF589Q86UQ0 364 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 FOXP4Q8IVH2 680 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 DIAPH3Q9NSV4 1193 aa21.71■■□□□ 1.07
VEGFA-222ENST00000520948 SAP30BPQ9UHR5 308 aaKnown RBP21.71■■□□□ 1.07
VEGFA-222ENST00000520948 FCGRTP55899 365 aa21.7■■□□□ 1.06
VEGFA-222ENST00000520948 CCDC84Q86UT8 332 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-222ENST00000520948 EPB41L4AQ9HCS5 686 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-222ENST00000520948 MCM9Q9NXL9 1143 aa21.7■■□□□ 1.06
VEGFA-222ENST00000520948 BIN2Q9UBW5 565 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-222ENST00000520948 AFG3L2Q9Y4W6 797 aa21.7■■□□□ 1.06
VEGFA-222ENST00000520948 TRIM75PA6NK02 468 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 CCL5P13501 91 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 FXR1P51114 621 aaKnown RBP eCLIP21.69■■□□□ 1.06
VEGFA-222ENST00000520948 PLCD1P51178 756 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 SBK1Q52WX2 424 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 CTR9Q6PD62 1173 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 FASTKD5Q7L8L6 764 aaKnown RBP21.69■■□□□ 1.06
VEGFA-222ENST00000520948 TTC6Q86TZ1 520 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 IFNL3Q8IZI9 196 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 EHD4Q9H223 541 aa21.69■■□□□ 1.06
VEGFA-222ENST00000520948 IL25Q9H293 177 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms