RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
TMEM55A-205ENST00000520709 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 RLBP1P12271 317 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 BACE1P56817 501 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 MTMR2Q13614 643 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 TGFBRAP1Q8WUH2 860 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 DEFB118Q96PH6 123 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 GINM1Q9NU53 330 aa16.58■□□□□ 0.24
TMEM55A-205ENST00000520709 LAMA3Q16787 3333 aa16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 HMGCRP04035 888 aa16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 PALD1Q9ULE6 856 aa16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 ZBTB21Q9ULJ3 1066 aa16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 BAZ2AQ9UIF9 1905 aaKnown RBP16.57■□□□□ 0.24
TMEM55A-205ENST00000520709 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
TMEM55A-205ENST00000520709 OS9Q13438 667 aaPredicted RBP16.56■□□□□ 0.24
TMEM55A-205ENST00000520709 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
TMEM55A-205ENST00000520709 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
TMEM55A-205ENST00000520709 C19orf81C9J6K1 198 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 GDF11O95390 407 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 HERVK_113P62684 666 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 TRIM32Q13049 653 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 TRIB2Q92519 343 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 NR2E3Q9Y5X4 410 aa16.55■□□□□ 0.24
TMEM55A-205ENST00000520709 USP17L10C9JJH3 530 aa16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 IRX3P78415 501 aaPredicted RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 POTEEQ6S8J3 1075 aa16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 ANKLE1Q8NAG6 615 aa16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 DIS3LQ8TF46 1054 aaKnown RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 P2RX7Q99572 595 aaKnown RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 TMOD4Q9NZQ9 345 aa16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 SAP30BPQ9UHR5 308 aaKnown RBP16.54■□□□□ 0.24
TMEM55A-205ENST00000520709 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 PEX10O60683 326 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 TFRCP02786 760 aaKnown RBP16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 HLA-DOAP06340 250 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 CYP7A1P22680 504 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 CERS3Q8IU89 383 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 FTSJ3Q8IY81 847 aaKnown RBP16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 PAWRQ96IZ0 340 aaKnown RBP16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 C12orf42Q96LP6 360 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 EHD4Q9H223 541 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 RBPJLQ9UBG7 517 aa16.53■□□□□ 0.24
TMEM55A-205ENST00000520709 A0A1W2PPC1 479 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 TMED8Q6PL24 325 aaPredicted RBP16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 SOCS4Q8WXH5 440 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 USP6NLQ92738 828 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 ANTXR1Q9H6X2 564 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 NDUFB9Q9Y6M9 179 aa16.52■□□□□ 0.24
TMEM55A-205ENST00000520709 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
TMEM55A-205ENST00000520709 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 EVI5O60447 810 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 XRCC5P13010 732 aaKnown RBP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 ERVK-24P63145 666 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 NECAB2Q7Z6G3 386 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 MAGEB6Q8N7X4 407 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 MIGA1Q8NAN2 632 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 HMX1Q9NP08 348 aaPredicted RBP16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
TMEM55A-205ENST00000520709 GH2P01242 217 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 Q3C1V9 767 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 GPRC5AQ8NFJ5 357 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 PORCNQ9H237 461 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 EXOC6BQ9Y2D4 811 aa16.5■□□□□ 0.23
TMEM55A-205ENST00000520709 LTBP2Q14767 1821 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 CNMDO75829 334 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 MAPK4P31152 587 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 MORN1Q5T089 497 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 SERPINB13Q9UIV8 391 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 COL6A3P12111 3177 aa16.49■□□□□ 0.23
TMEM55A-205ENST00000520709 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 CYP2B6P20813 491 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 SHMT1P34896 483 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 USP5P45974 858 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 GABPAQ06546 454 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 AACSQ86V21 672 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms