RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 ELNP15502 786 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 ZAP70P43403 619 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 BACE1P56817 501 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 TGFBRAP1Q8WUH2 860 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 PAK6Q9NQU5 681 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-224ENST00000520522 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 C19orf81C9J6K1 198 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 HMGCRP04035 888 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 RLBP1P12271 317 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 IRX3P78415 501 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 HNRNPUQ00839 825 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 MTMR2Q13614 643 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 CRACR2BQ8N4Y2 399 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 GTF3C2Q8WUA4 911 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 DPF3Q92784 378 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 CRISPLD2Q9H0B8 497 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 PIH1D3Q9NQM4 214 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
CTNNA1-224ENST00000520522 USP17L10C9JJH3 530 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 CYP7A1P22680 504 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 CEP85Q6P2H3 762 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 DEFB118Q96PH6 123 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 PALD1Q9ULE6 856 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 ZBTB21Q9ULJ3 1066 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
CTNNA1-224ENST00000520522 IDH1O75874 414 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 GDF11O95390 407 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 TFRCP02786 760 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 HERVK_113P62684 666 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 DYNLL1P63167 89 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 JAG1P78504 1218 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 CCDC8Q9H0W5 538 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 EHD4Q9H223 541 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
CTNNA1-224ENST00000520522 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 DDX60LQ5H9U9 1706 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 PLXNB2O15031 1838 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 MYH1P12882 1939 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 MAP3K12Q12852 859 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 HSP90AB4PQ58FF6 505 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 TATDN1Q6P1N9 297 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 SOCS4Q8WXH5 440 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 C12orf42Q96LP6 360 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 P2RX7Q99572 595 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
CTNNA1-224ENST00000520522 A0A1W2PPC1 479 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 GH2P01242 217 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 MAPK4P31152 587 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 USP5P45974 858 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 NECAB2Q7Z6G3 386 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 TTC6Q86TZ1 520 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 AACSQ86V21 672 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 TRMT44Q8IYL2 757 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 MAGEB6Q8N7X4 407 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 MIGA1Q8NAN2 632 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 NUDT12Q9BQG2 462 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 TXNRD2Q9NNW7 524 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 RBM27Q9P2N5 1060 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 EXOC6BQ9Y2D4 811 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
CTNNA1-224ENST00000520522 EVI5O60447 810 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 MS4A1P11836 297 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 USP14P54578 494 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 ERVK-24P63145 666 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 TTF1Q15361 905 aaPredicted RBP10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 MAP3K21Q5TCX8 1036 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 RHPN1Q8TCX5 695 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 TRIB2Q92519 343 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 USP6NLQ92738 828 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 PAWRQ96IZ0 340 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 RIOK1Q9BRS2 568 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 ANTXR1Q9H6X2 564 aa10.82□□□□□ -0.68
CTNNA1-224ENST00000520522 RBPJLQ9UBG7 517 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms