RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 METTL16Q86W50 562 aaKnown RBP10.04□□□□□ -0.8
VAPB-206ENST00000520497 ZFPM1Q8IX07 1006 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 SLC44A5Q8NCS7 719 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 SMC1BQ8NDV3 1235 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 IGDCC4Q8TDY8 1250 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 BRF1Q92994 677 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 DYNLL2Q96FJ2 89 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 TMEM87BQ96K49 555 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
VAPB-206ENST00000520497 SH2B1Q9NRF2 756 aaPredicted RBP10.04□□□□□ -0.8
VAPB-206ENST00000520497 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 TPCN1Q9ULQ1 816 aa10.04□□□□□ -0.8
VAPB-206ENST00000520497 ANGEL1Q9UNK9 670 aaKnown RBP10.04□□□□□ -0.8
VAPB-206ENST00000520497 PTPRFP10586 1907 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 CLRN2A0PK11 232 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 MYO1BO43795 1136 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 PRDM1O75626 825 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 HLA-DOAP06340 250 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 FXR2P51116 673 aaKnown RBP eCLIP10.03□□□□□ -0.8
VAPB-206ENST00000520497 ST3GAL1Q11201 340 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 TCP10Q12799 353 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 SEC23AQ15436 765 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 ME3Q16798 604 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 KIF4BQ2VIQ3 1234 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
VAPB-206ENST00000520497 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 FAM83AQ86UY5 434 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 SGMS1Q86VZ5 419 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 FAM151AQ8WW52 585 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 L3MBTL3Q96JM7 780 aaPredicted RBP10.03□□□□□ -0.8
VAPB-206ENST00000520497 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
VAPB-206ENST00000520497 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 ZNF287Q9HBT7 754 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 GPHNQ9NQX3 736 aaPredicted RBP10.03□□□□□ -0.8
VAPB-206ENST00000520497 TOMM22Q9NS69 142 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 SWAP70Q9UH65 585 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 SERPINB13Q9UIV8 391 aa10.03□□□□□ -0.8
VAPB-206ENST00000520497 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
VAPB-206ENST00000520497 NID2Q14112 1375 aa10.02□□□□□ -0.8
VAPB-206ENST00000520497 TCP10L2B9ZVM9 353 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 H7C1D1 291 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 DDIT3P35638 169 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 EPS15P42566 896 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 LIFRP42702 1097 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 APOBRQ0VD83 1088 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 TBC1D10BQ4KMP7 808 aaPredicted RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 COL13A1Q5TAT6 717 aaPredicted RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 ZNF274Q96GC6 653 aaPredicted RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
VAPB-206ENST00000520497 TCP11L1Q9NUJ3 509 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 PI4KBQ9UBF8 816 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 PARP14Q460N5 1801 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 TNKSO95271 1327 aa10.02□□□□□ -0.81
VAPB-206ENST00000520497 IFIT3O14879 490 aaKnown RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 PFKFB2O60825 505 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 SHMT1P34896 483 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 FGD1P98174 961 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 TNFAIP1Q13829 316 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 TMEM67Q5HYA8 995 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 FAM47AQ5JRC9 791 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 APOA5Q6Q788 366 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 ENAHQ8N8S7 591 aaPredicted RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 ZSCAN10Q96SZ4 725 aaPredicted RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 VEZTQ9HBM0 779 aa10.01□□□□□ -0.81
VAPB-206ENST00000520497 ASTN2O75129 1339 aaPredicted RBP10.01□□□□□ -0.81
VAPB-206ENST00000520497 TRPM7Q96QT4 1865 aa10□□□□□ -0.81
VAPB-206ENST00000520497 KLF18A0A0U1RQI7 1052 aa10□□□□□ -0.81
VAPB-206ENST00000520497 TSPY2A6NKD2 308 aa10□□□□□ -0.81
VAPB-206ENST00000520497 PDIA3P30101 505 aaKnown RBP10□□□□□ -0.81
VAPB-206ENST00000520497 NOVP48745 357 aa10□□□□□ -0.81
VAPB-206ENST00000520497 RCAN1P53805 252 aa10□□□□□ -0.81
VAPB-206ENST00000520497 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
VAPB-206ENST00000520497 MAP3K10Q02779 954 aa10□□□□□ -0.81
VAPB-206ENST00000520497 WTAPQ15007 396 aa10□□□□□ -0.81
VAPB-206ENST00000520497 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
VAPB-206ENST00000520497 RCSD1Q6JBY9 416 aa10□□□□□ -0.81
VAPB-206ENST00000520497 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
VAPB-206ENST00000520497 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
VAPB-206ENST00000520497 FOXP4Q8IVH2 680 aaPredicted RBP10□□□□□ -0.81
VAPB-206ENST00000520497 CCDC83Q8IWF9 413 aa10□□□□□ -0.81
VAPB-206ENST00000520497 ZNF444Q8N0Y2 327 aaPredicted RBP10□□□□□ -0.81
VAPB-206ENST00000520497 TMTC2Q8N394 836 aa10□□□□□ -0.81
VAPB-206ENST00000520497 NEDD1Q8NHV4 660 aa10□□□□□ -0.81
VAPB-206ENST00000520497 ANKS1AQ92625 1134 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms