RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 NIP7Q9Y221 180 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTHRC1-203ENST00000520337 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
CTHRC1-203ENST00000520337 PCDHGC4Q9Y5F7 938 aa9.68□□□□□ -0.86
CTHRC1-203ENST00000520337 DNMT3AQ9Y6K1 912 aaPredicted RBP9.68□□□□□ -0.86
CTHRC1-203ENST00000520337 SALL3Q9BXA9 1300 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 AK9Q5TCS8 1911 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 USP17L3A6NCW0 530 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 USP17L4A6NCW7 530 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 IRS4O14654 1257 aaPredicted RBP9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 ATP9BO43861 1147 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 BNIP3LO60238 219 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 NTSR2O95665 410 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 BMP4P12644 408 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 PTPN12Q05209 780 aaKnown RBP9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 TBC1D9BQ66K14 1250 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 GPAT2Q6NUI2 795 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 USP17L2Q6R6M4 530 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 USP17L1Q7RTZ2 530 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 BEND7Q8N7W2 519 aaPredicted RBP9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 GOLGA6L1Q8N7Z2 621 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 RHPN1Q8TCX5 695 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 UCN2Q96RP3 112 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 SPEF2Q9C093 1822 aa9.67□□□□□ -0.86
CTHRC1-203ENST00000520337 SH3TC1Q8TE82 1336 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 QSER1Q2KHR3 1735 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 SASH1O94885 1247 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 SSFA2P28290 1259 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 RFC4P35249 363 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 HSP90AB4PQ58FF6 505 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 ARSJQ5FYB0 599 aaPredicted RBP9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 TTLL11Q8NHH1 800 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 CAMKK2Q96RR4 588 aa9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.66□□□□□ -0.86
CTHRC1-203ENST00000520337 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 PDE8AO60658 829 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 IGHA1P01876 353 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 EPHA4P54764 986 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 CTSWP56202 376 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 FOXK2Q01167 660 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 C8orf34Q49A92 452 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 ATG9AQ7Z3C6 839 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 ERC1Q8IUD2 1116 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 BACH2Q9BYV9 841 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 IL1RAPL2Q9NP60 686 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
CTHRC1-203ENST00000520337 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 ATXN7O15265 892 aaPredicted RBP9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 GYS1P13807 737 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 HCLS1P14317 486 aaPredicted RBP9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 PDE1AP54750 535 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 G3BP1Q13283 466 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 NFIXQ14938 502 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 TEAD4Q15561 434 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 BICDL1Q6ZP65 573 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 LARGE2Q8N3Y3 721 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 SETDB2Q96T68 719 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 SIL1Q9H173 461 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 GREM2Q9H772 168 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 STAP2Q9UGK3 403 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 CHMP3Q9Y3E7 222 aa9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 GPC6Q9Y625 555 aaPredicted RBP9.64□□□□□ -0.87
CTHRC1-203ENST00000520337 M0R2N6 131 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 CIAO1O76071 339 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 OS9Q13438 667 aaPredicted RBP9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 EZH2Q15910 746 aaKnown RBP9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 BMP2KLQ5H9B9 411 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 TTC22Q5TAA0 569 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 SAMD5Q5TGI4 173 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 SLCO4C1Q6ZQN7 724 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 PUS3Q9BZE2 481 aaKnown RBP9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 BCL11AQ9H165 835 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 A0A1B0GUL6 1792 aa9.63□□□□□ -0.87
CTHRC1-203ENST00000520337 COL4A1P02462 1669 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 TNRC6CQ9HCJ0 1690 aaKnown RBP9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 PALM3A6NDB9 673 aaPredicted RBP9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 EYA2O00167 538 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 C2CD2LO14523 706 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 FAM157BP0CG42 384 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 ARAFP10398 606 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 MX1P20591 662 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 TM4SF1P30408 202 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 CLDN10P78369 228 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 CTBSQ01459 385 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 TFCP2Q12800 502 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 IFIT5Q13325 482 aaKnown RBP9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 CCDC102BQ68D86 513 aa9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 COL23A1Q86Y22 540 aaPredicted RBP9.62□□□□□ -0.87
CTHRC1-203ENST00000520337 GALNT6Q8NCL4 622 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms