RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 DNAJC18Q9H819 358 aa23.6■■□□□ 1.37
CHMP7-204ENST00000519414 HMX1Q9NP08 348 aaPredicted RBP23.6■■□□□ 1.37
CHMP7-204ENST00000519414 JAG1P78504 1218 aa23.59■■□□□ 1.37
CHMP7-204ENST00000519414 ATP8B2P98198 1209 aa23.59■■□□□ 1.37
CHMP7-204ENST00000519414 ZKSCAN2Q63HK3 967 aa23.59■■□□□ 1.37
CHMP7-204ENST00000519414 P2RX7Q99572 595 aaKnown RBP23.59■■□□□ 1.37
CHMP7-204ENST00000519414 USP17L10C9JJH3 530 aa23.58■■□□□ 1.37
CHMP7-204ENST00000519414 GPRC5AQ8NFJ5 357 aa23.58■■□□□ 1.37
CHMP7-204ENST00000519414 DIS3LQ8TF46 1054 aaKnown RBP23.58■■□□□ 1.37
CHMP7-204ENST00000519414 PALD1Q9ULE6 856 aa23.58■■□□□ 1.37
CHMP7-204ENST00000519414 SURF6O75683 361 aaKnown RBP23.57■■□□□ 1.36
CHMP7-204ENST00000519414 HERVK_113P62684 666 aa23.57■■□□□ 1.36
CHMP7-204ENST00000519414 TRIM32Q13049 653 aa23.57■■□□□ 1.36
CHMP7-204ENST00000519414 GDF11O95390 407 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 HLA-DOAP06340 250 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 ZAP70P43403 619 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 TRIB2Q92519 343 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 NUDT12Q9BQG2 462 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 NBPF3Q9H094 633 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 ZBTB21Q9ULJ3 1066 aa23.56■■□□□ 1.36
CHMP7-204ENST00000519414 RANBP2P49792 3224 aaKnown RBP23.55■■□□□ 1.36
CHMP7-204ENST00000519414 ATAD5Q96QE3 1844 aa23.55■■□□□ 1.36
CHMP7-204ENST00000519414 XRCC5P13010 732 aaKnown RBP23.55■■□□□ 1.36
CHMP7-204ENST00000519414 SOCS4Q8WXH5 440 aa23.55■■□□□ 1.36
CHMP7-204ENST00000519414 TXNRD2Q9NNW7 524 aa23.55■■□□□ 1.36
CHMP7-204ENST00000519414 PIH1D3Q9NQM4 214 aaKnown RBP23.55■■□□□ 1.36
CHMP7-204ENST00000519414 STAP2Q9UGK3 403 aa23.55■■□□□ 1.36
CHMP7-204ENST00000519414 NOP58Q9Y2X3 529 aaKnown RBP23.55■■□□□ 1.36
CHMP7-204ENST00000519414 CYP2B6P20813 491 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 MAPK4P31152 587 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 SHROOM1Q2M3G4 852 aaPredicted RBP23.54■■□□□ 1.36
CHMP7-204ENST00000519414 MAP3K21Q5TCX8 1036 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 GTF3C2Q8WUA4 911 aaPredicted RBP23.54■■□□□ 1.36
CHMP7-204ENST00000519414 RBPJLQ9UBG7 517 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 SAP30BPQ9UHR5 308 aaKnown RBP23.54■■□□□ 1.36
CHMP7-204ENST00000519414 OGDHLQ9ULD0 1010 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
CHMP7-204ENST00000519414 MAST2Q6P0Q8 1798 aa23.53■■□□□ 1.36
CHMP7-204ENST00000519414 CYP7A1P22680 504 aa23.53■■□□□ 1.36
CHMP7-204ENST00000519414 DYNLL1P63167 89 aaKnown RBP23.53■■□□□ 1.36
CHMP7-204ENST00000519414 PDE3AQ14432 1141 aa23.53■■□□□ 1.36
CHMP7-204ENST00000519414 CERS3Q8IU89 383 aa23.53■■□□□ 1.36
CHMP7-204ENST00000519414 TRMT44Q8IYL2 757 aaKnown RBP23.53■■□□□ 1.36
CHMP7-204ENST00000519414 DBNLQ9UJU6 430 aaKnown RBP23.53■■□□□ 1.36
CHMP7-204ENST00000519414 SIPA1L1O43166 1804 aa23.53■■□□□ 1.36
CHMP7-204ENST00000519414 PEX10O60683 326 aa23.52■■□□□ 1.36
CHMP7-204ENST00000519414 PRKAR2AP13861 404 aaKnown RBP23.52■■□□□ 1.36
CHMP7-204ENST00000519414 MNX1P50219 401 aaPredicted RBP23.52■■□□□ 1.36
CHMP7-204ENST00000519414 USP17L2Q6R6M4 530 aa23.52■■□□□ 1.36
CHMP7-204ENST00000519414 C11orf49Q9H6J7 331 aa23.52■■□□□ 1.36
CHMP7-204ENST00000519414 EMILIN3Q9NT22 766 aa23.52■■□□□ 1.36
CHMP7-204ENST00000519414 SZT2Q5T011 3432 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 BMP8BP34820 402 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 ERVK-9P63128 1117 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 ERVK-24P63145 666 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 Q3C1V9 767 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 CCAR1Q8IX12 1150 aaKnown RBP23.51■■□□□ 1.35
CHMP7-204ENST00000519414 C7orf61Q8IZ16 206 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 GDF15Q99988 308 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 CCDC8Q9H0W5 538 aaPredicted RBP23.51■■□□□ 1.35
CHMP7-204ENST00000519414 C1orf115Q9H7X2 142 aa23.51■■□□□ 1.35
CHMP7-204ENST00000519414 TLR7Q9NYK1 1049 aaKnown RBP23.51■■□□□ 1.35
CHMP7-204ENST00000519414 SOX1O00570 391 aaPredicted RBP23.5■■□□□ 1.35
CHMP7-204ENST00000519414 IDH1O75874 414 aaKnown RBP23.5■■□□□ 1.35
CHMP7-204ENST00000519414 TATDN1Q6P1N9 297 aa23.5■■□□□ 1.35
CHMP7-204ENST00000519414 USP6NLQ92738 828 aa23.5■■□□□ 1.35
CHMP7-204ENST00000519414 EAF2Q96CJ1 260 aaPredicted RBP23.5■■□□□ 1.35
CHMP7-204ENST00000519414 GH2P01242 217 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 ZKSCAN1P17029 563 aaPredicted RBP23.49■■□□□ 1.35
CHMP7-204ENST00000519414 RGS2P41220 211 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 USP5P45974 858 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 TMED8Q6PL24 325 aaPredicted RBP23.49■■□□□ 1.35
CHMP7-204ENST00000519414 GPR142Q7Z601 462 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
CHMP7-204ENST00000519414 MIGA1Q8NAN2 632 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 C12orf42Q96LP6 360 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 PAGR1Q9BTK6 254 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 PORCNQ9H237 461 aa23.49■■□□□ 1.35
CHMP7-204ENST00000519414 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
CHMP7-204ENST00000519414 MORN1Q5T089 497 aa23.48■■□□□ 1.35
CHMP7-204ENST00000519414 POTEEQ6S8J3 1075 aa23.48■■□□□ 1.35
CHMP7-204ENST00000519414 PLEKHH3Q7Z736 793 aa23.48■■□□□ 1.35
CHMP7-204ENST00000519414 EHD4Q9H223 541 aa23.48■■□□□ 1.35
CHMP7-204ENST00000519414 SERPINB13Q9UIV8 391 aa23.48■■□□□ 1.35
CHMP7-204ENST00000519414 CACNB2Q08289 660 aaPredicted RBP23.47■■□□□ 1.35
CHMP7-204ENST00000519414 ITPRIPQ8IWB1 547 aa23.47■■□□□ 1.35
CHMP7-204ENST00000519414 MAGEB6Q8N7X4 407 aa23.47■■□□□ 1.35
CHMP7-204ENST00000519414 LRCH3Q96II8 777 aa23.47■■□□□ 1.35
CHMP7-204ENST00000519414 RABGAP1Q9Y3P9 1069 aa23.47■■□□□ 1.35
CHMP7-204ENST00000519414 PLXNB2O15031 1838 aa23.47■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L15C9J2P7 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L13C9JLJ4 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L11C9JVI0 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L18D6R9N7 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L22D6RA61 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L17D6RBQ6 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L19D6RCP7 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L20D6RJB6 530 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP14P54578 494 aa23.46■■□□□ 1.35
CHMP7-204ENST00000519414 USP17L24Q0WX57 530 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms