RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 BACE1P56817 501 aa19.36■□□□□ 0.69
VPS37A-204ENST00000519381 PDE3AQ14432 1141 aa19.36■□□□□ 0.69
VPS37A-204ENST00000519381 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.36■□□□□ 0.69
VPS37A-204ENST00000519381 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
VPS37A-204ENST00000519381 MAP3K12Q12852 859 aa19.35■□□□□ 0.69
VPS37A-204ENST00000519381 RRP1BQ14684 758 aaKnown RBP19.35■□□□□ 0.69
VPS37A-204ENST00000519381 ADGRA1Q86SQ6 560 aa19.35■□□□□ 0.69
VPS37A-204ENST00000519381 PIH1D3Q9NQM4 214 aaKnown RBP19.35■□□□□ 0.69
VPS37A-204ENST00000519381 DBNLQ9UJU6 430 aaKnown RBP19.35■□□□□ 0.69
VPS37A-204ENST00000519381 ZBTB21Q9ULJ3 1066 aa19.35■□□□□ 0.69
VPS37A-204ENST00000519381 NOP58Q9Y2X3 529 aaKnown RBP19.35■□□□□ 0.69
VPS37A-204ENST00000519381 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
VPS37A-204ENST00000519381 AACSQ86V21 672 aa19.34■□□□□ 0.69
VPS37A-204ENST00000519381 MAGEB6Q8N7X4 407 aa19.34■□□□□ 0.69
VPS37A-204ENST00000519381 MIGA1Q8NAN2 632 aa19.34■□□□□ 0.69
VPS37A-204ENST00000519381 GTF3C2Q8WUA4 911 aaPredicted RBP19.34■□□□□ 0.69
VPS37A-204ENST00000519381 PAK6Q9NQU5 681 aaPredicted RBP19.34■□□□□ 0.69
VPS37A-204ENST00000519381 TLR7Q9NYK1 1049 aaKnown RBP19.34■□□□□ 0.69
VPS37A-204ENST00000519381 SIPA1L1O43166 1804 aa19.34■□□□□ 0.69
VPS37A-204ENST00000519381 TRIOBPQ9H2D6 2365 aa19.33■□□□□ 0.69
VPS37A-204ENST00000519381 HERVK_113P62684 666 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 DYNLL1P63167 89 aaKnown RBP19.33■□□□□ 0.68
VPS37A-204ENST00000519381 HSP90AB4PQ58FF6 505 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 NECAB2Q7Z6G3 386 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 UBE2Q1Q7Z7E8 422 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 GPRC5AQ8NFJ5 357 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 SOCS4Q8WXH5 440 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 PAGR1Q9BTK6 254 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 HMX1Q9NP08 348 aaPredicted RBP19.33■□□□□ 0.68
VPS37A-204ENST00000519381 MORF4L1Q9UBU8 362 aa19.33■□□□□ 0.68
VPS37A-204ENST00000519381 MYO5AQ9Y4I1 1855 aaKnown RBP19.33■□□□□ 0.68
VPS37A-204ENST00000519381 DOCK3Q8IZD9 2030 aa19.32■□□□□ 0.68
VPS37A-204ENST00000519381 NUDT12Q9BQG2 462 aa19.32■□□□□ 0.68
VPS37A-204ENST00000519381 DNAJC18Q9H819 358 aa19.32■□□□□ 0.68
VPS37A-204ENST00000519381 MYH1P12882 1939 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 ZBTB7BO15156 539 aaPredicted RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 MAPK4P31152 587 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 HOXA7P31268 230 aaPredicted RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 ZYXQ15942 572 aaKnown RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 CEP85Q6P2H3 762 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 TMED8Q6PL24 325 aaPredicted RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 USP17L2Q6R6M4 530 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 TTC6Q86TZ1 520 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 EAF2Q96CJ1 260 aaPredicted RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 P2RX7Q99572 595 aaKnown RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 RBM27Q9P2N5 1060 aaKnown RBP19.31■□□□□ 0.68
VPS37A-204ENST00000519381 EXOC6BQ9Y2D4 811 aa19.31■□□□□ 0.68
VPS37A-204ENST00000519381 RPTORQ8N122 1335 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 GH2P01242 217 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 MS4A1P11836 297 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 RLBP1P12271 317 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 CYP2B6P20813 491 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 RAB3GAP1Q15042 981 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 TTF1Q15361 905 aaPredicted RBP19.3■□□□□ 0.68
VPS37A-204ENST00000519381 METTL16Q86W50 562 aaKnown RBP19.3■□□□□ 0.68
VPS37A-204ENST00000519381 TRMT44Q8IYL2 757 aaKnown RBP19.3■□□□□ 0.68
VPS37A-204ENST00000519381 ANKLE1Q8NAG6 615 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 PAWRQ96IZ0 340 aaKnown RBP19.3■□□□□ 0.68
VPS37A-204ENST00000519381 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 CABP5Q9NP86 173 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 SERPINB13Q9UIV8 391 aa19.3■□□□□ 0.68
VPS37A-204ENST00000519381 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
VPS37A-204ENST00000519381 USP14P54578 494 aa19.29■□□□□ 0.68
VPS37A-204ENST00000519381 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
VPS37A-204ENST00000519381 CRISPLD2Q9H0B8 497 aa19.29■□□□□ 0.68
VPS37A-204ENST00000519381 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
VPS37A-204ENST00000519381 APBB1O00213 710 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
VPS37A-204ENST00000519381 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
VPS37A-204ENST00000519381 RGS2P41220 211 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 ERVK-9P63128 1117 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 ERVK-24P63145 666 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 CCNA1P78396 465 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 SHROOM1Q2M3G4 852 aaPredicted RBP19.28■□□□□ 0.68
VPS37A-204ENST00000519381 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
VPS37A-204ENST00000519381 WDR78Q5VTH9 848 aa19.28■□□□□ 0.68
VPS37A-204ENST00000519381 HMMRO75330 724 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
VPS37A-204ENST00000519381 JAG1P78504 1218 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 CLASRPQ8N2M8 674 aaKnown RBP19.27■□□□□ 0.68
VPS37A-204ENST00000519381 TRIB2Q92519 343 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
VPS37A-204ENST00000519381 NBPF3Q9H094 633 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 EHD4Q9H223 541 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 IL1RAPL2Q9NP60 686 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 GJD2Q9UKL4 321 aa19.27■□□□□ 0.68
VPS37A-204ENST00000519381 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L15C9J2P7 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L13C9JLJ4 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L11C9JVI0 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L18D6R9N7 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L22D6RA61 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L17D6RBQ6 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L19D6RCP7 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L20D6RJB6 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 IFIT2P09913 472 aaKnown RBP19.26■□□□□ 0.67
VPS37A-204ENST00000519381 USP17L24Q0WX57 530 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
VPS37A-204ENST00000519381 C7orf61Q8IZ16 206 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms