RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 CCAR1Q8IX12 1150 aaKnown RBP23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 TRMT2AQ8IZ69 625 aaKnown RBP23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 SH3RF3Q8TEJ3 882 aaPredicted RBP23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 UBE2OQ9C0C9 1292 aaKnown RBP23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 GINM1Q9NU53 330 aa23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 STXBP5LQ9Y2K9 1186 aa23.33■■□□□ 1.33
CTNNA1-213ENST00000519113 ALPK3Q96L96 1907 aa23.33■■□□□ 1.32
CTNNA1-213ENST00000519113 TRIM34Q9BYJ4 488 aa23.32■■□□□ 1.32
CTNNA1-213ENST00000519113 CUL9Q8IWT3 2517 aa23.32■■□□□ 1.32
CTNNA1-213ENST00000519113 USP17L10C9JJH3 530 aa23.31■■□□□ 1.32
CTNNA1-213ENST00000519113 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
CTNNA1-213ENST00000519113 FOXP4Q8IVH2 680 aaPredicted RBP23.31■■□□□ 1.32
CTNNA1-213ENST00000519113 GTF3C2Q8WUA4 911 aaPredicted RBP23.31■■□□□ 1.32
CTNNA1-213ENST00000519113 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.31■■□□□ 1.32
CTNNA1-213ENST00000519113 MCAMP43121 646 aa23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 G3BP1Q13283 466 aaKnown RBP eCLIP23.3■■□□□ 1.323e-10■□□□□ 10.3
CTNNA1-213ENST00000519113 NAA16Q6N069 864 aaPredicted RBP23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 Q7L0L9 218 aa23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 CRACR2BQ8N4Y2 399 aaPredicted RBP23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 ARHGAP45Q92619 1136 aa23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 TXNRD2Q9NNW7 524 aa23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 AATFQ9NY61 560 aaKnown RBP eCLIP23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 PFASO15067 1338 aa23.3■■□□□ 1.32
CTNNA1-213ENST00000519113 RGS2P41220 211 aa23.29■■□□□ 1.32
CTNNA1-213ENST00000519113 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
CTNNA1-213ENST00000519113 METTL16Q86W50 562 aaKnown RBP23.29■■□□□ 1.32
CTNNA1-213ENST00000519113 MTMR10Q9NXD2 777 aa23.29■■□□□ 1.32
CTNNA1-213ENST00000519113 RBPJLQ9UBG7 517 aa23.29■■□□□ 1.32
CTNNA1-213ENST00000519113 COL6A1P12109 1028 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 PPP4CP60510 307 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 ERVK-9P63128 1117 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 ERVK-24P63145 666 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 TGFBRAP1Q8WUH2 860 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 USP6NLQ92738 828 aa23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
CTNNA1-213ENST00000519113 PEX10O60683 326 aa23.27■■□□□ 1.32
CTNNA1-213ENST00000519113 GPR142Q7Z601 462 aa23.27■■□□□ 1.32
CTNNA1-213ENST00000519113 PLEKHH3Q7Z736 793 aa23.27■■□□□ 1.32
CTNNA1-213ENST00000519113 MAPKAPK5Q8IW41 473 aa23.27■■□□□ 1.32
CTNNA1-213ENST00000519113 CWC22Q9HCG8 908 aaKnown RBP23.27■■□□□ 1.32
CTNNA1-213ENST00000519113 ATAD5Q96QE3 1844 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 JAG1P78504 1218 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 Q3C1V9 767 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 MORN1Q5T089 497 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 LHX8Q68G74 356 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 ATF7IPQ6VMQ6 1270 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 APBA2Q99767 749 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 PAGR1Q9BTK6 254 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 PORCNQ9H237 461 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 DNAJC18Q9H819 358 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 ZBTB21Q9ULJ3 1066 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 FLT1P17948 1338 aa23.26■■□□□ 1.31
CTNNA1-213ENST00000519113 IGSF3O75054 1194 aa23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 GDF11O95390 407 aa23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 GNAI2P04899 355 aa23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 USP17L2Q6R6M4 530 aa23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 PALD1Q9ULE6 856 aa23.25■■□□□ 1.31
CTNNA1-213ENST00000519113 DNAH12Q6ZR08 3092 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 PLXNB2O15031 1838 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 GLRX3O76003 335 aaKnown RBP23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 HLA-DOAP06340 250 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 CCND3P30281 292 aaPredicted RBP23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 CCL14Q16627 93 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 LRRC26Q2I0M4 334 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 TTC39AQ5SRH9 613 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 SNRKQ9NRH2 765 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 LAMA2P24043 3122 aaKnown RBP23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 UNC80Q8N2C7 3258 aa23.24■■□□□ 1.31
CTNNA1-213ENST00000519113 CCNA1P78396 465 aa23.23■■□□□ 1.31
CTNNA1-213ENST00000519113 EMILIN3Q9NT22 766 aa23.23■■□□□ 1.31
CTNNA1-213ENST00000519113 RABGAP1Q9Y3P9 1069 aa23.23■■□□□ 1.31
CTNNA1-213ENST00000519113 MDM2Q00987 491 aaPredicted RBP23.22■■□□□ 1.31
CTNNA1-213ENST00000519113 SHROOM1Q2M3G4 852 aaPredicted RBP23.22■■□□□ 1.31
CTNNA1-213ENST00000519113 MFSD14CQ5VZR4 134 aa23.22■■□□□ 1.31
CTNNA1-213ENST00000519113 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
CTNNA1-213ENST00000519113 GPR108Q9NPR9 543 aa23.22■■□□□ 1.31
CTNNA1-213ENST00000519113 PNMA6EA0A0J9YXQ4 647 aa23.21■■□□□ 1.31
CTNNA1-213ENST00000519113 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
CTNNA1-213ENST00000519113 MAP2K5Q13163 448 aa23.21■■□□□ 1.31
CTNNA1-213ENST00000519113 SAP30BPQ9UHR5 308 aaKnown RBP23.21■■□□□ 1.31
CTNNA1-213ENST00000519113 USP17L15C9J2P7 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L13C9JLJ4 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L11C9JVI0 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L18D6R9N7 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L22D6RA61 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L17D6RBQ6 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L19D6RCP7 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L20D6RJB6 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 CYP2E1P05181 493 aaPredicted RBP23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 USP17L24Q0WX57 530 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 FAM109BQ6ICB4 259 aaPredicted RBP23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 ADGRA1Q86SQ6 560 aa23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 LBHD1Q9BQE6 289 aaPredicted RBP23.2■■□□□ 1.3
CTNNA1-213ENST00000519113 GH2P01242 217 aa23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 TNNI3KQ59H18 835 aa23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 POTEEQ6S8J3 1075 aa23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 C12orf42Q96LP6 360 aa23.19■■□□□ 1.3
CTNNA1-213ENST00000519113 FEZ1Q99689 392 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms