RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 CCER1Q8TC90 406 aaPredicted RBP8.65□□□□□ -1.02
CCDC6-203ENST00000518638 PNMA5Q96PV4 448 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 C11orf16Q9NQ32 467 aa8.65□□□□□ -1.02
CCDC6-203ENST00000518638 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
CCDC6-203ENST00000518638 TNRC6CQ9HCJ0 1690 aaKnown RBP8.65□□□□□ -1.03
CCDC6-203ENST00000518638 KIF13BQ9NQT8 1826 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 C4BP0C0L5 1744 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 ZBTB39O15060 712 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
CCDC6-203ENST00000518638 ZAP70P43403 619 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 GP2P55259 537 aaKnown RBP8.64□□□□□ -1.03
CCDC6-203ENST00000518638 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC6-203ENST00000518638 ZNF211Q13398 564 aaPredicted RBP8.64□□□□□ -1.03
CCDC6-203ENST00000518638 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
CCDC6-203ENST00000518638 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 ICMTO60725 284 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 MPSTP25325 297 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 TGFB2P61812 414 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 KCNA1Q09470 495 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 PCSK7Q16549 785 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 ZCRB1Q8TBF4 217 aaKnown RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 SMARCC1Q92922 1105 aaPredicted RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 FRRS1LQ9P0K9 344 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.63□□□□□ -1.03
CCDC6-203ENST00000518638 UBR3Q6ZT12 1888 aa8.63□□□□□ -1.03
CCDC6-203ENST00000518638 PALLDQ8WX93 1383 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 FAM13AO94988 1023 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 EIF1AXP47813 144 aaKnown RBP8.62□□□□□ -1.03
CCDC6-203ENST00000518638 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
CCDC6-203ENST00000518638 RGL4Q8IZJ4 473 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 SMC1BQ8NDV3 1235 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 IP6K1Q92551 441 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 AKTIPQ9H8T0 292 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 ANO2Q9NQ90 1003 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 PKD1L3Q7Z443 1732 aa8.62□□□□□ -1.03
CCDC6-203ENST00000518638 EDC4Q6P2E9 1401 aaKnown RBP8.62□□□□□ -1.03
CCDC6-203ENST00000518638 H3BRB1 525 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 GSC2O15499 205 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 EGFRP00533 1210 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 NFKB1P19838 968 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 CCINQ13939 588 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 GRIK5Q16478 980 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 ALKBH2Q6NS38 261 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
CCDC6-203ENST00000518638 LPIN3Q9BQK8 851 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 GSX2Q9BZM3 304 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 TUT1Q9H6E5 874 aaKnown RBP8.61□□□□□ -1.03
CCDC6-203ENST00000518638 NMRK2Q9NPI5 230 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 KCNMB2Q9Y691 235 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 SMG6Q86US8 1419 aaKnown RBP8.61□□□□□ -1.03
CCDC6-203ENST00000518638 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
CCDC6-203ENST00000518638 TOGARAM1Q9Y4F4 1720 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 PXDNLA1KZ92 1463 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 CPB1P15086 417 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC6-203ENST00000518638 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
CCDC6-203ENST00000518638 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 RTL1A6NKG5 1358 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 SBNO2Q9Y2G9 1366 aa8.6□□□□□ -1.03
CCDC6-203ENST00000518638 MEGF6O75095 1541 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 PATL2C9JE40 543 aaKnown RBP8.59□□□□□ -1.03
CCDC6-203ENST00000518638 DLL1O00548 723 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 HSPA1AP0DMV8 641 aaKnown RBP8.59□□□□□ -1.03
CCDC6-203ENST00000518638 HSPA1BP0DMV9 641 aaKnown RBP8.59□□□□□ -1.03
CCDC6-203ENST00000518638 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 RAPGEF4Q8WZA2 1011 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 KRTAP4-9Q9BYQ8 210 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 KIAA1551Q9HCM1 1747 aa8.59□□□□□ -1.03
CCDC6-203ENST00000518638 BRCA1P38398 1863 aaKnown RBP8.59□□□□□ -1.03
CCDC6-203ENST00000518638 XYLBO75191 536 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 DEAF1O75398 565 aaPredicted RBP8.58□□□□□ -1.04
CCDC6-203ENST00000518638 MED26O95402 600 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
CCDC6-203ENST00000518638 ECM1Q16610 540 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 ARHGAP27Q6ZUM4 889 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 NME9Q86XW9 330 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 TERF2IPQ9NYB0 399 aa8.58□□□□□ -1.04
CCDC6-203ENST00000518638 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
CCDC6-203ENST00000518638 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 MZF1P28698 734 aaPredicted RBP8.57□□□□□ -1.04
CCDC6-203ENST00000518638 AMPHP49418 695 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 PERM1Q5SV97 790 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 C9orf131Q5VYM1 1079 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 ELMSAN1Q6PJG2 1045 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 NLGN1Q8N2Q7 840 aa8.57□□□□□ -1.04
CCDC6-203ENST00000518638 LTV1Q96GA3 475 aaPredicted RBP8.57□□□□□ -1.04
CCDC6-203ENST00000518638 MRPL18Q9H0U6 180 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms