RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CCDC129Q6ZRS4 1044 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 BRI3BPQ8WY22 251 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 TBC1D2Q9BYX2 928 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 AFG3L2Q9Y4W6 797 aa26.33■■□□□ 1.81
VEGFA-217ENST00000518538 CYP2D7A0A087X1C5 515 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 HIP1O00291 1037 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 IGF2BP3O00425 579 aaKnown RBP eCLIP26.32■■□□□ 1.8
VEGFA-217ENST00000518538 CXCL11O14625 94 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 APPP05067 770 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 OTUD7BQ6GQQ9 843 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 PTPN18Q99952 460 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 NACAP1Q9BZK3 213 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 SWAP70Q9UH65 585 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 TSKSQ9UJT2 592 aa26.32■■□□□ 1.8
VEGFA-217ENST00000518538 USP17L5A8MUK1 530 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 GDF11O95390 407 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 TDO2P48775 406 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 CERKLQ49MI3 558 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-217ENST00000518538 CCDC84Q86UT8 332 aaPredicted RBP26.31■■□□□ 1.8
VEGFA-217ENST00000518538 IFNL3Q8IZI9 196 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 DIAPH3Q9NSV4 1193 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 ZBTB21Q9ULJ3 1066 aa26.31■■□□□ 1.8
VEGFA-217ENST00000518538 PHIPQ8WWQ0 1821 aa26.3■■□□□ 1.8
VEGFA-217ENST00000518538 LBX1P52954 281 aa26.3■■□□□ 1.8
VEGFA-217ENST00000518538 JAG1P78504 1218 aa26.3■■□□□ 1.8
VEGFA-217ENST00000518538 DYNLL2Q96FJ2 89 aa26.3■■□□□ 1.8
VEGFA-217ENST00000518538 SHROOM1Q2M3G4 852 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-217ENST00000518538 C16orf86Q6ZW13 317 aa26.29■■□□□ 1.8
VEGFA-217ENST00000518538 SLC44A5Q8NCS7 719 aa26.29■■□□□ 1.8
VEGFA-217ENST00000518538 CFHR5Q9BXR6 569 aa26.29■■□□□ 1.8
VEGFA-217ENST00000518538 AS3MTQ9HBK9 375 aa26.29■■□□□ 1.8
VEGFA-217ENST00000518538 A0A0G2JLL6 359 aaPredicted RBP26.28■■□□□ 1.8
VEGFA-217ENST00000518538 SMIM22K7EJ46 135 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 FOXP2O15409 715 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 GH2P01242 217 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 PRRT2Q7Z6L0 340 aaPredicted RBP26.28■■□□□ 1.8
VEGFA-217ENST00000518538 ZNF280CQ8ND82 737 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 NAPBQ9H115 298 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 ROBO3Q96MS0 1386 aa26.28■■□□□ 1.8
VEGFA-217ENST00000518538 TRIM75PA6NK02 468 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 MINDY4BA8MYZ0 360 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 CDK8P49336 464 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 ABCB5Q2M3G0 1257 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 CWC27Q6UX04 472 aaKnown RBP26.27■■□□□ 1.8
VEGFA-217ENST00000518538 ZNF589Q86UQ0 364 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-217ENST00000518538 WDR18Q9BV38 432 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 ZCCHC17Q9NP64 241 aaKnown RBP26.27■■□□□ 1.8
VEGFA-217ENST00000518538 CABP5Q9NP86 173 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 PRDM10Q9NQV6 1147 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 PPP4R2Q9NY27 417 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 CCDC171Q6TFL3 1326 aa26.27■■□□□ 1.8
VEGFA-217ENST00000518538 BTBD19C9JJ37 291 aa26.26■■□□□ 1.79
VEGFA-217ENST00000518538 MFAP1P55081 439 aaKnown RBP26.26■■□□□ 1.79
VEGFA-217ENST00000518538 SPP2Q13103 211 aa26.26■■□□□ 1.79
VEGFA-217ENST00000518538 MOGSQ13724 837 aa26.26■■□□□ 1.79
VEGFA-217ENST00000518538 VPS53Q5VIR6 699 aa26.26■■□□□ 1.79
VEGFA-217ENST00000518538 FAM43AQ8N2R8 423 aa26.26■■□□□ 1.79
VEGFA-217ENST00000518538 TBC1D8O95759 1140 aa26.25■■□□□ 1.79
VEGFA-217ENST00000518538 FASTKD5Q7L8L6 764 aaKnown RBP26.25■■□□□ 1.79
VEGFA-217ENST00000518538 ANKRD23Q86SG2 305 aa26.25■■□□□ 1.79
VEGFA-217ENST00000518538 SKAP1Q86WV1 359 aa26.24■■□□□ 1.79
VEGFA-217ENST00000518538 CCDC17Q96LX7 622 aa26.24■■□□□ 1.79
VEGFA-217ENST00000518538 HSPD1P10809 573 aaKnown RBP26.23■■□□□ 1.79
VEGFA-217ENST00000518538 ALX1Q15699 326 aa26.23■■□□□ 1.79
VEGFA-217ENST00000518538 PTPRFP10586 1907 aa26.23■■□□□ 1.79
VEGFA-217ENST00000518538 MPHOSPH10O00566 681 aaKnown RBP26.22■■□□□ 1.79
VEGFA-217ENST00000518538 GUCY1A2P33402 732 aa26.22■■□□□ 1.79
VEGFA-217ENST00000518538 PPARAQ07869 468 aa26.22■■□□□ 1.79
VEGFA-217ENST00000518538 RAB3GAP1Q15042 981 aa26.22■■□□□ 1.79
VEGFA-217ENST00000518538 NOM1Q5C9Z4 860 aaKnown RBP26.22■■□□□ 1.79
VEGFA-217ENST00000518538 GPAT2Q6NUI2 795 aa26.22■■□□□ 1.79
VEGFA-217ENST00000518538 TMEM179Q6ZVK1 233 aa26.22■■□□□ 1.79
VEGFA-217ENST00000518538 ZMYM6O95789 1325 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 BACE1P56817 501 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 CRHR2Q13324 411 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 TAF1CQ15572 869 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-217ENST00000518538 SH3D19Q5HYK7 790 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 GADL1Q6ZQY3 521 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 PROCA1Q8NCQ7 364 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-217ENST00000518538 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 ZNF287Q9HBT7 754 aa26.21■■□□□ 1.79
VEGFA-217ENST00000518538 MYH8P13535 1937 aa26.2■■□□□ 1.79
VEGFA-217ENST00000518538 USP17L10C9JJH3 530 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 PDHXO00330 501 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 SLC3A2P08195 630 aaKnown RBP26.2■■□□□ 1.78
VEGFA-217ENST00000518538 AKR1B1P15121 316 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 CHMLP26374 656 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 HMGCS2P54868 508 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 MTMR2Q13614 643 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 SEPT2Q15019 361 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 ZFYVE28Q9HCC9 887 aa26.2■■□□□ 1.78
VEGFA-217ENST00000518538 RAD50Q92878 1312 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 C19orf81C9J6K1 198 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 FGAP02671 866 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 BMP2KLQ5H9B9 411 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 STK11IPQ8N1F8 1099 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 RUFY2Q8WXA3 655 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 MKNK2Q9HBH9 465 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 AGTPBP1Q9UPW5 1226 aa26.19■■□□□ 1.78
VEGFA-217ENST00000518538 SLC45A1Q9Y2W3 748 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms