RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 GNAI2P04899 355 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 EPHX2P34913 555 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 ADD1P35611 737 aaKnown RBP7.59□□□□□ -1.19
MRPS28-203ENST00000518371 GMPSP49915 693 aaPredicted RBP7.59□□□□□ -1.19
MRPS28-203ENST00000518371 RELBQ01201 579 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 TPRNQ4KMQ1 711 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 METTL24Q5JXM2 366 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 PNMA8AQ86V59 439 aaPredicted RBP7.59□□□□□ -1.19
MRPS28-203ENST00000518371 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.59□□□□□ -1.19
MRPS28-203ENST00000518371 SMC1BQ8NDV3 1235 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 KLHDC4Q8TBB5 520 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 TAF1DQ9H5J8 278 aaPredicted RBP7.59□□□□□ -1.19
MRPS28-203ENST00000518371 KCNQ5Q9NR82 932 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 SBF1O95248 1867 aa7.59□□□□□ -1.19
MRPS28-203ENST00000518371 LAMB2P55268 1798 aa7.59□□□□□ -1.2
MRPS28-203ENST00000518371 MROH5Q6ZUA9 1318 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 TAF1P21675 1872 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 H7C1D1 291 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 SNAP23O00161 211 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 EYA2O00167 538 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 PSMD14O00487 310 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 LILRA1O75019 489 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 EPS15P42566 896 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 CTSOP43234 321 aaPredicted RBP7.58□□□□□ -1.2
MRPS28-203ENST00000518371 SRSF11Q05519 484 aaKnown RBP7.58□□□□□ -1.2
MRPS28-203ENST00000518371 LRRC24Q50LG9 513 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 BEND7Q8N7W2 519 aaPredicted RBP7.58□□□□□ -1.2
MRPS28-203ENST00000518371 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
MRPS28-203ENST00000518371 PANK1Q8TE04 598 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 COA1Q9GZY4 146 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 CNOT7Q9UIV1 285 aaKnown RBP7.58□□□□□ -1.2
MRPS28-203ENST00000518371 RIPOR2Q9Y4F9 1068 aa7.58□□□□□ -1.2
MRPS28-203ENST00000518371 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 SRGAP3O43295 1099 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 RLBP1P12271 317 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 KLRK1P26718 216 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 RFX5P48382 616 aaPredicted RBP7.57□□□□□ -1.2
MRPS28-203ENST00000518371 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
MRPS28-203ENST00000518371 FSTL1Q12841 308 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 UBE4AQ14139 1066 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 NBPF20Q3BBV1 942 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 ZNF804AQ7Z570 1209 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 INSM2Q96T92 566 aaPredicted RBP7.57□□□□□ -1.2
MRPS28-203ENST00000518371 SIL1Q9H173 461 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 ZNF395Q9H8N7 513 aaPredicted RBP7.57□□□□□ -1.2
MRPS28-203ENST00000518371 GPRC5DQ9NZD1 345 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 CCDC88AQ3V6T2 1871 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 MED23Q9ULK4 1368 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 COL4A1P02462 1669 aa7.57□□□□□ -1.2
MRPS28-203ENST00000518371 ZBBXA8MT70 800 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 ZBTB7BO15156 539 aaPredicted RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 GPR37L1O60883 481 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 PDE8BO95263 885 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 VIL1P09327 827 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 IFIT1P09914 478 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 FBXO45P0C2W1 286 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 RPS12P25398 132 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 SCNN1DP51172 638 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 GTF2IP78347 998 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 ATP8B2P98198 1209 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 G3BP1Q13283 466 aaKnown RBP eCLIP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 CAVIN4Q5BKX8 364 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 C15orf52Q6ZUT6 534 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 LDHDQ86WU2 507 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 DPF2Q92785 391 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 CD209Q9NNX6 404 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 ADARB2Q9NS39 739 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 PA2G4Q9UQ80 394 aaKnown RBP7.56□□□□□ -1.2
MRPS28-203ENST00000518371 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 COL4A5P29400 1685 aa7.56□□□□□ -1.2
MRPS28-203ENST00000518371 FRAT2O75474 233 aaPredicted RBP7.55□□□□□ -1.2
MRPS28-203ENST00000518371 CIAO1O76071 339 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 SLC5A1P13866 664 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 HSPA6P17066 643 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 HIBADHP31937 336 aaKnown RBP7.55□□□□□ -1.2
MRPS28-203ENST00000518371 IL15P40933 162 aaPredicted RBP7.55□□□□□ -1.2
MRPS28-203ENST00000518371 GYG1P46976 350 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 MTX1Q13505 466 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
MRPS28-203ENST00000518371 STRIP1Q5VSL9 837 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 ATG9AQ7Z3C6 839 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 AGBL3Q8NEM8 1001 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 CHMP4BQ9H444 224 aaKnown RBP7.55□□□□□ -1.2
MRPS28-203ENST00000518371 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 COPRSQ9NQ92 184 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 DDX19BQ9UMR2 479 aa7.55□□□□□ -1.2
MRPS28-203ENST00000518371 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
MRPS28-203ENST00000518371 DICER1Q9UPY3 1922 aaKnown RBP7.54□□□□□ -1.2
MRPS28-203ENST00000518371 PNMA6EA0A0J9YXQ4 647 aa7.54□□□□□ -1.2
MRPS28-203ENST00000518371 SHTN1A0MZ66 631 aa7.54□□□□□ -1.2
MRPS28-203ENST00000518371 IL1R1P14778 569 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms