RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
PABPC1-206ENST00000518293 PCOLCE2Q9UKZ9 415 aa6.29□□□□□ -1.4
PABPC1-206ENST00000518293 PRAMEF27A3QJZ7 478 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 SCAMP3O14828 347 aaKnown RBP6.28□□□□□ -1.4
PABPC1-206ENST00000518293 CILPO75339 1184 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 PAPLNO95428 1278 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 FAM87AP0C7U9 286 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 EIF4A3P38919 411 aaKnown RBP6.28□□□□□ -1.4
PABPC1-206ENST00000518293 RPL6Q02878 288 aaKnown RBP6.28□□□□□ -1.4
PABPC1-206ENST00000518293 CDK5R2Q13319 367 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 ZNF792Q3KQV3 632 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 SPRED2Q7Z698 418 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
PABPC1-206ENST00000518293 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 NETO1Q8TDF5 533 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 KCNQ5Q9NR82 932 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 PICK1Q9NRD5 415 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 ADAMTS1Q9UHI8 967 aa6.28□□□□□ -1.4
PABPC1-206ENST00000518293 GREM1O60565 184 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 BNIP3Q12983 259 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 ARHGAP27Q6ZUM4 889 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 METTL16Q86W50 562 aaKnown RBP6.27□□□□□ -1.41
PABPC1-206ENST00000518293 PLD6Q8N2A8 252 aaKnown RBP6.27□□□□□ -1.41
PABPC1-206ENST00000518293 FBXO27Q8NI29 283 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 RNF34Q969K3 372 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 WNT10AQ9GZT5 417 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
PABPC1-206ENST00000518293 SSU72Q9NP77 194 aaKnown RBP6.27□□□□□ -1.41
PABPC1-206ENST00000518293 GRK4P32298 578 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 ZNF394Q53GI3 561 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 SNAP47Q5SQN1 464 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 WFDC3Q8IUB2 231 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 FAM181AQ8N9Y4 354 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 ZNF507Q8TCN5 953 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 ZNF296Q8WUU4 475 aaPredicted RBP6.26□□□□□ -1.41
PABPC1-206ENST00000518293 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
PABPC1-206ENST00000518293 UNC13AQ9UPW8 1703 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 CD8BP10966 210 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 FUT4P22083 530 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 ETF1P62495 437 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 HDLBPQ00341 1268 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 SLBPQ14493 270 aaKnown RBP eCLIP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 NKG7Q16617 165 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 C9orf131Q5VYM1 1079 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 CDC37L1Q7L3B6 337 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 USP48Q86UV5 1035 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 RC3H2Q9HBD1 1191 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 SUPT16HQ9Y5B9 1047 aaKnown RBP6.25□□□□□ -1.41
PABPC1-206ENST00000518293 PCDHGB7Q9Y5F8 929 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 CORINQ9Y5Q5 1042 aa6.25□□□□□ -1.41
PABPC1-206ENST00000518293 LEFTY1O75610 366 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 BPNT1O95861 308 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 CRKP46108 304 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 PRKCQQ04759 706 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 IFI16Q16666 785 aaKnown RBP6.24□□□□□ -1.41
PABPC1-206ENST00000518293 ATG4DQ86TL0 474 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-206ENST00000518293 KCT2Q8NC54 265 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 DUSP23Q9BVJ7 150 aa6.24□□□□□ -1.41
PABPC1-206ENST00000518293 DDX41Q9UJV9 622 aaKnown RBP6.24□□□□□ -1.41
PABPC1-206ENST00000518293 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-206ENST00000518293 ROBO2Q9HCK4 1378 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 TLR3O15455 904 aaKnown RBP6.23□□□□□ -1.41
PABPC1-206ENST00000518293 CAP2P40123 477 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 MPP2Q14168 576 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 ZNF648Q5T619 568 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-206ENST00000518293 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 HID1Q8IV36 788 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 PI4K2BQ8TCG2 481 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 EAF1Q96JC9 268 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-206ENST00000518293 HRASLS5Q96KN8 279 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 MKNK2Q9HBH9 465 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 TJP2Q9UDY2 1190 aa6.23□□□□□ -1.41
PABPC1-206ENST00000518293 TMEM265A0A087WTH1 108 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 GRIN3BO60391 1043 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 PGRP06401 933 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 AOC3Q16853 763 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
PABPC1-206ENST00000518293 ARMCX6Q7L4S7 300 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 FAM168AQ92567 244 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 SPON2Q9BUD6 331 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-206ENST00000518293 CARMIL2Q6F5E8 1435 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 PRR36Q9H6K5 1346 aa6.22□□□□□ -1.41
PABPC1-206ENST00000518293 FARP2O94887 1054 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 LRIG2O94898 1065 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 CEACAM5P06731 702 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 RNASE1P07998 156 aaKnown RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 PDE4BQ07343 736 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 ANGEL2Q5VTE6 544 aaKnown RBP6.21□□□□□ -1.42
PABPC1-206ENST00000518293 FAM214BQ7L5A3 538 aa6.21□□□□□ -1.42
PABPC1-206ENST00000518293 KIAA0825Q8IV33 1275 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms