RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 NFIXQ14938 502 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 PARP10Q53GL7 1025 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 VTI1AQ96AJ9 217 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 AIDAQ96BJ3 306 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 NOP58Q9Y2X3 529 aaKnown RBP8.53□□□□□ -1.04
CPS1-210ENST00000518043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
CPS1-210ENST00000518043 SH3TC1Q8TE82 1336 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 SALL3Q9BXA9 1300 aa8.53□□□□□ -1.04
CPS1-210ENST00000518043 TM4SF1P30408 202 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 SCNN1AP37088 669 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 TXLNAP40222 546 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 BAG6P46379 1132 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 PTSQ03393 145 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 LMBR1LQ6UX01 489 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 KLHDC4Q8TBB5 520 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.05
CPS1-210ENST00000518043 PDGFDQ9GZP0 370 aaPredicted RBP8.52□□□□□ -1.05
CPS1-210ENST00000518043 PA2G4Q9UQ80 394 aaKnown RBP8.52□□□□□ -1.05
CPS1-210ENST00000518043 EXOC6BQ9Y2D4 811 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 ZNF652Q9Y2D9 606 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 HCN4Q9Y3Q4 1203 aa8.52□□□□□ -1.05
CPS1-210ENST00000518043 RTL9Q8NET4 1388 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 POLRMTO00411 1230 aaKnown RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 IRS4O14654 1257 aaPredicted RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 SMARCA5O60264 1052 aaPredicted RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 RFC4P35249 363 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 PTPN12Q05209 780 aaKnown RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 SLC10A5Q5PT55 438 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 CAPN12Q6ZSI9 719 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 TTLL11Q8NHH1 800 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 OTUD7AQ8TE49 926 aaPredicted RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 COL26A1Q96A83 441 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 COPRSQ9NQ92 184 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 TFCP2L1Q9NZI6 479 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 TRMT112Q9UI30 125 aaKnown RBP8.51□□□□□ -1.05
CPS1-210ENST00000518043 DYRK1BQ9Y463 629 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 ARAP2Q8WZ64 1704 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
CPS1-210ENST00000518043 LRRC37AA6NMS7 1700 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 HMMRO75330 724 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 SASH1O94885 1247 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 CTSWP56202 376 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 NPM2Q86SE8 214 aaKnown RBP8.5□□□□□ -1.05
CPS1-210ENST00000518043 CHD1LQ86WJ1 897 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 GREM2Q9H772 168 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 ZDHHC3Q9NYG2 299 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
CPS1-210ENST00000518043 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 PDE8AO60658 829 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 SURF6O75683 361 aaKnown RBP8.49□□□□□ -1.05
CPS1-210ENST00000518043 MSX1P28360 303 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 PRR5LQ6MZQ0 368 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 C16orf71Q8IYS4 520 aaPredicted RBP8.49□□□□□ -1.05
CPS1-210ENST00000518043 ALDH16A1Q8IZ83 802 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 GAS2L1Q99501 681 aaPredicted RBP8.49□□□□□ -1.05
CPS1-210ENST00000518043 PHACTR1Q9C0D0 580 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPS1-210ENST00000518043 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
CPS1-210ENST00000518043 ZNF609O15014 1411 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 ATP4AP20648 1035 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
CPS1-210ENST00000518043 SF3B3Q15393 1217 aaKnown RBP8.48□□□□□ -1.05
CPS1-210ENST00000518043 ANKRD45Q5TZF3 282 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 C1orf53Q5VUE5 145 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 KCTD17Q8N5Z5 321 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 CCDC155Q8N6L0 562 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 PUS3Q9BZE2 481 aaKnown RBP8.48□□□□□ -1.05
CPS1-210ENST00000518043 GPAMQ9HCL2 828 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
CPS1-210ENST00000518043 F11P03951 625 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
CPS1-210ENST00000518043 ARID4AP29374 1257 aaPredicted RBP8.47□□□□□ -1.05
CPS1-210ENST00000518043 RGS3P49796 1198 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 KCNA1Q09470 495 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
CPS1-210ENST00000518043 LRRC24Q50LG9 513 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 ZNF787Q6DD87 383 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
CPS1-210ENST00000518043 VGLL2Q8N8G2 317 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 SIL1Q9H173 461 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 IL1RAPL2Q9NP60 686 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
CPS1-210ENST00000518043 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms