RNA–Protein interactions for RNA: ENST00000517979.1

CCDC25-202, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-202ENST00000517979 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
CCDC25-202ENST00000517979 PTPRFP10586 1907 aa16.62■□□□□ 0.25
CCDC25-202ENST00000517979 LACTBP83111 547 aaPredicted RBP16.61■□□□□ 0.25
CCDC25-202ENST00000517979 FOXP4Q8IVH2 680 aaPredicted RBP16.61■□□□□ 0.25
CCDC25-202ENST00000517979 HAUS7Q99871 368 aa16.61■□□□□ 0.25
CCDC25-202ENST00000517979 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
CCDC25-202ENST00000517979 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
CCDC25-202ENST00000517979 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
CCDC25-202ENST00000517979 ZNF532Q9HCE3 1301 aa16.61■□□□□ 0.25
CCDC25-202ENST00000517979 MYH1P12882 1939 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 CYP2C8P10632 490 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 RGS19P49795 217 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 MLLT1Q03111 559 aaPredicted RBP16.6■□□□□ 0.25
CCDC25-202ENST00000517979 SPP2Q13103 211 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 CRNKL1Q9BZJ0 848 aaKnown RBP16.6■□□□□ 0.25
CCDC25-202ENST00000517979 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC25-202ENST00000517979 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 ADGRA2Q96PE1 1338 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 HTTP42858 3142 aa16.6■□□□□ 0.25
CCDC25-202ENST00000517979 ASNSP08243 561 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 METTL16Q86W50 562 aaKnown RBP16.59■□□□□ 0.25
CCDC25-202ENST00000517979 MS4A3Q96HJ5 214 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 GPATCH3Q96I76 525 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 SLC45A1Q9Y2W3 748 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
CCDC25-202ENST00000517979 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 GDF11O95390 407 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 HMGCS2P54868 508 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 SMCR8Q8TEV9 937 aaPredicted RBP16.58■□□□□ 0.24
CCDC25-202ENST00000517979 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 PCDHB15Q9Y5E8 787 aa16.58■□□□□ 0.24
CCDC25-202ENST00000517979 LOC285556D6RIA3 1793 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
CCDC25-202ENST00000517979 POLR3DP05423 398 aaPredicted RBP16.57■□□□□ 0.24
CCDC25-202ENST00000517979 ADD2P35612 726 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
CCDC25-202ENST00000517979 TREML2Q5T2D2 321 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
CCDC25-202ENST00000517979 EHD4Q9H223 541 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 SERPINB13Q9UIV8 391 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 ZBTB21Q9ULJ3 1066 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 PTCH2Q9Y6C5 1203 aa16.57■□□□□ 0.24
CCDC25-202ENST00000517979 MBD4O95243 580 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 GNRH1P01148 92 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 BCRP11274 1271 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 PSMC4P43686 418 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 JAG1P78504 1218 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 MTMR2Q13614 643 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 MCM9Q9NXL9 1143 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
CCDC25-202ENST00000517979 MYH7P12883 1935 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 FMNL1O95466 1100 aaPredicted RBP16.55■□□□□ 0.24
CCDC25-202ENST00000517979 PABPC4Q13310 644 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC25-202ENST00000517979 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 TSHZ3Q63HK5 1081 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 WDR18Q9BV38 432 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 TMOD4Q9NZQ9 345 aa16.55■□□□□ 0.24
CCDC25-202ENST00000517979 GH2P01242 217 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 HOXD10P28358 340 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 CTGFP29279 349 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 PLCD1P51178 756 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 FCGRTP55899 365 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 BACE1P56817 501 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 SH3D19Q5HYK7 790 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 ARMC5Q96C12 935 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 CENPFP49454 3210 aa16.54■□□□□ 0.24
CCDC25-202ENST00000517979 CHGBP05060 677 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 OSBPP22059 807 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 PRMT2P55345 433 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 CERKLQ49MI3 558 aaPredicted RBP16.53■□□□□ 0.24
CCDC25-202ENST00000517979 TATDN1Q6P1N9 297 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 DCP1AQ9NPI6 582 aaPredicted RBP16.53■□□□□ 0.24
CCDC25-202ENST00000517979 SRRDQ9UH36 339 aa16.53■□□□□ 0.24
CCDC25-202ENST00000517979 MYPNQ86TC9 1320 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 USP17L10C9JJH3 530 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 PRKAB2O43741 272 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 SHMT1P34896 483 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
CCDC25-202ENST00000517979 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
CCDC25-202ENST00000517979 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms